Gm57678 (predicted gene, 57678) - Rat Genome Database

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Gene: Gm57678 (predicted gene, 57678) Mus musculus
Analyze
Symbol: Gm57678 (Ensembl: AL672103.2)
Name: predicted gene, 57678
RGD ID: 39130723
MGI Page MGI
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: LOC115489231; small nucleolar RNA SNORA48
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X97,951,058 - 97,951,198 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX97,951,058 - 97,951,198 (+)EnsemblGRCm39 Ensembl
GRCm38X98,907,452 - 98,907,592 (+)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic MapXC3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm57678
4 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse
1357500Mdmsc6_mmodifier of muscularity 6 (mouse)Not determinedX75306671109306758Mouse
1302054Gct4_mgranulosa cell tumorigenesis 4 (mouse)Not determinedX76124336102062720Mouse
11075102Modc2_mmodifier of Odc2 (mouse)X80189914114190059Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004940536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL672103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000239945
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX97,951,058 - 97,951,198 (+)Ensembl
RefSeq Acc Id: XR_004940536
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X97,951,058 - 97,951,198 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000119448 Ensembl
MGD MGI:7512311 ENTREZGENE
NCBI Gene LOC115489231 ENTREZGENE
PhenoGen Gm57678 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-08-22 Gm57678  predicted gene, 57678  LOC115489231  small nucleolar RNA SNORA48  Symbol and/or name change 5135510 APPROVED