Gm57668 (predicted gene, 57668) - Rat Genome Database

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Gene: Gm57668 (predicted gene, 57668) Mus musculus
Analyze
Symbol: Gm57668 (Ensembl: AL671860.1)
Name: predicted gene, 57668
RGD ID: 39129918
MGI Page MGI
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: LOC115489221; small nucleolar RNA SNORA48
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X74,543,467 - 74,543,610 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX74,543,467 - 74,543,610 (+)EnsemblGRCm39 Ensembl
GRCm38X75,499,861 - 75,500,004 (+)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic MapXA7.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm57668
1 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5472235188722351Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6134360689843606Mouse
25314318Sccor2_msynaptonemal complex length to mean MLH1 count ratio 2 (mouse)X7054360696543606Mouse
1357730Hstx1_mhybrid sterility, X chromosome 1 (mouse)Not determinedX7145385277600812Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004940526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL671860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000240412
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX74,543,467 - 74,543,610 (+)Ensembl
RefSeq Acc Id: XR_004940526
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X74,543,467 - 74,543,610 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000118973 Ensembl
MGD MGI:7512291 ENTREZGENE
NCBI Gene LOC115489221 ENTREZGENE
PhenoGen Gm57668 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-08-22 Gm57668  predicted gene, 57668  LOC115489221  small nucleolar RNA SNORA48  Symbol and/or name change 5135510 APPROVED