LOC102724378 (uncharacterized LOC102724378) - Rat Genome Database

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Gene: LOC102724378 (uncharacterized LOC102724378) Homo sapiens
Analyze
Symbol: LOC102724378
Name: uncharacterized LOC102724378
RGD ID: 38670283
Description:
Type: ncrna
RefSeq Status: VALIDATED
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382237,744,310 - 37,745,944 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372238,140,317 - 38,141,951 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map22q13.1NCBI
CHM1_12238,093,462 - 38,102,191 (-)NCBICHM1_1
T2T-CHM13v2.02238,205,829 - 38,207,463 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 22q13.1(chr22:37537317-37803357)x3 copy number gain See cases [RCV000142655] Chr22:37537317..37803357 [GRCh38]
Chr22:37933324..38199364 [GRCh37]
Chr22:36263270..36529310 [NCBI36]
Chr22:22q13.1		 uncertain significance
GRCh38/hg38 22q13.1(chr22:37721777-38886664)x1 copy number loss See cases [RCV000051367] Chr22:37721777..38886664 [GRCh38]
Chr22:38117784..39282669 [GRCh37]
Chr22:36447730..37612615 [NCBI36]
Chr22:22q13.1		 pathogenic
GRCh38/hg38 22q12.3-13.1(chr22:35333993-38900177)x1 copy number loss See cases [RCV000051364] Chr22:35333993..38900177 [GRCh38]
Chr22:35729986..39296182 [GRCh37]
Chr22:34059986..37626128 [NCBI36]
Chr22:22q12.3-13.1		 pathogenic
GRCh38/hg38 22q13.1(chr22:37447222-39103680)x1 copy number loss See cases [RCV000141783] Chr22:37447222..39103680 [GRCh38]
Chr22:37843259..39499685 [GRCh37]
Chr22:36173205..37829631 [NCBI36]
Chr22:22q13.1		 pathogenic
GRCh38/hg38 22q13.1-13.2(chr22:37721797-40860953)x3 copy number gain See cases [RCV000051685] Chr22:37721797..40860953 [GRCh38]
Chr22:38117804..41256957 [GRCh37]
Chr22:36447750..39586903 [NCBI36]
Chr22:22q13.1-13.2		 pathogenic
GRCh38/hg38 22q12.3-13.33(chr22:33768441-50739977)x3 copy number gain See cases [RCV000051682] Chr22:33768441..50739977 [GRCh38]
Chr22:34164428..51178405 [GRCh37]
Chr22:32494428..49525271 [NCBI36]
Chr22:22q12.3-13.33		 pathogenic
GRCh38/hg38 22q12.3-13.33(chr22:37061769-50738932)x3 copy number gain See cases [RCV000051684] Chr22:37061769..50738932 [GRCh38]
Chr22:37457809..51177360 [GRCh37]
Chr22:35787755..49524226 [NCBI36]
Chr22:22q12.3-13.33		 pathogenic
GRCh38/hg38 22q11.1-13.33(chr22:16916608-50739836)x3 copy number gain See cases [RCV000133646] Chr22:16916608..50739836 [GRCh38]
Chr22:17397498..51178264 [GRCh37]
Chr22:15777498..49525130 [NCBI36]
Chr22:22q11.1-13.33		 pathogenic
GRCh38/hg38 22q11.1-13.33(chr22:16916743-50739785)x3 copy number gain See cases [RCV000134730] Chr22:16916743..50739785 [GRCh38]
Chr22:17397633..51178213 [GRCh37]
Chr22:15777633..49525079 [NCBI36]
Chr22:22q11.1-13.33		 pathogenic
GRCh38/hg38 22q12.3-13.1(chr22:36068124-38002382)x3 copy number gain See cases [RCV000051683] Chr22:36068124..38002382 [GRCh38]
Chr22:36464172..38398389 [GRCh37]
Chr22:34794118..36728335 [NCBI36]
Chr22:22q12.3-13.1		 pathogenic

Expression


Sequence


Reference Sequences
RefSeq Acc Id: NR_160696
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,744,310 - 37,745,944 (-)NCBI
T2T-CHM13v2.02238,205,829 - 38,207,463 (-)NCBI
Sequence:
RefSeq Acc Id: NR_160697
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,744,310 - 37,745,944 (-)NCBI
T2T-CHM13v2.02238,205,829 - 38,207,463 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
COSMIC LOC102724378 COSMIC
GTEx LOC102724378 GTEx
Human Proteome Map LOC102724378 Human Proteome Map
NCBI Gene LOC102724378 ENTREZGENE
RNAcentral URS0000E60A2D RNACentral
  URS0000E60B15 RNACentral