LOC107987046 (uncharacterized LOC107987046) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Pathways
Gene: LOC107987046 (uncharacterized LOC107987046) Homo sapiens
Analyze
Symbol: LOC107987046
Name: uncharacterized LOC107987046
RGD ID: 38668789
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3896,228,232 - 6,328,268 (-)NCBIGRCh38GRCh38hg38GRCh38
Cytogenetic Map9p24.1NCBI
CHM1_196,228,703 - 6,329,067 (-)NCBICHM1_1
T2T-CHM13v2.096,233,292 - 6,333,332 (-)NCBIT2T-CHM13v2.0
JBrowse:




References

Genomics

Variants

.
Variants in LOC107987046
50 total Variants

QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
628426103GWAS2334332_Hatopic asthma QTL GWAS2334332 (human)2e-31atopic asthma963059046305905Human
617127116GWAS2144615_Herythrocyte count QTL GWAS2144615 (human)2e-13erythrocyte count963179366317937Human
617042370GWAS2059869_Hwheezing QTL GWAS2059869 (human)7e-10wheezing962927986292799Human
597310620GWAS1406694_Hcreatinine measurement QTL GWAS1406694 (human)3e-09creatinine measurement963276906327691Human
628822129GWAS2730358_Hasthma QTL GWAS2730358 (human)5e-21asthma962559676255968Human
626446940GWAS2260873_Heosinophil count QTL GWAS2260873 (human)7e-15eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)962955876295588Human
628426104GWAS2334333_Hatopic asthma QTL GWAS2334333 (human)1e-12atopic asthma962526906252691Human
597074055GWAS1170129_Hchildhood onset asthma QTL GWAS1170129 (human)3e-08childhood onset asthma962312396231240Human
2302773MAMTS18_HMammary tumor susceptibility QTL 18 (human)0.039Mammary tumor susceptibility9528914931289149Human
617092319GWAS2109818_Hhemoglobin measurement QTL GWAS2109818 (human)3e-09hemoglobin measurement962616956261696Human
406925657GWAS574633_Hatopic asthma QTL GWAS574633 (human)2e-31atopic asthma963059046305905Human
616952284GWAS1969783_Hglycodeoxycholate measurement QTL GWAS1969783 (human)0.000005glycodeoxycholate measurement962780716278072Human
406925658GWAS574634_Hatopic asthma QTL GWAS574634 (human)1e-12atopic asthma962526906252691Human
597282437GWAS1378511_Hhemoglobin measurement QTL GWAS1378511 (human)3e-09hemoglobin measurement962616956261696Human
597079477GWAS1175551_Hred blood cell density measurement QTL GWAS1175551 (human)2e-22red blood cell density measurement963091886309189Human
407152224GWAS801200_Hchildhood onset asthma QTL GWAS801200 (human)1e-10childhood onset asthma962559676255968Human
407152226GWAS801202_Hchildhood onset asthma QTL GWAS801202 (human)6e-14childhood onset asthma962364076236408Human
597412284GWAS1508358_Hatopic asthma QTL GWAS1508358 (human)2e-31atopic asthma963059046305905Human
628429149GWAS2337378_Heosinophil count QTL GWAS2337378 (human)1e-56eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)962526906252691Human
406964840GWAS613816_Hneutrophil percentage of granulocytes QTL GWAS613816 (human)8e-23neutrophil percentage of granulocytes962886046288605Human
597084346GWAS1180420_Hadult onset asthma QTL GWAS1180420 (human)2e-09adult onset asthma962559676255968Human
628596826GWAS2505055_Hprostate carcinoma QTL GWAS2505055 (human)2e-08prostate integrity trait (VT:0010571)962533016253302Human
628820822GWAS2729051_Hhemoglobin measurement QTL GWAS2729051 (human)3e-09blood hemoglobin amount (VT:0001588)hemoglobin measurement (CMO:0000508)962616956261696Human
616525969GWAS1922552_Hserum creatinine amount QTL GWAS1922552 (human)9e-15serum creatinine amount962895046289505Human
628829003GWAS2737232_Herythrocyte count QTL GWAS2737232 (human)2e-13erythrocyte countred blood cell count (CMO:0000025)963179366317937Human
628813643GWAS2721872_Hserum creatinine amount QTL GWAS2721872 (human)3e-09serum creatinine amount963276906327691Human
406969715GWAS618691_Heosinophil percentage of leukocytes QTL GWAS618691 (human)9e-28eosinophil percentage of leukocytes962886046288605Human
407120758GWAS769734_Heosinophil count QTL GWAS769734 (human)7e-15eosinophil count962955876295588Human
597030822GWAS1126896_Hasthma, allergic disease QTL GWAS1126896 (human)2e-08asthma, allergic disease962330826233083Human
596989857GWAS1109376_Hmemory performance QTL GWAS1109376 (human)0.00001memory performance962363506236351Human
616518795GWAS1915378_Hasthma QTL GWAS1915378 (human)5e-21asthma962559676255968Human
407125628GWAS774604_Heosinophil count QTL GWAS774604 (human)3e-26eosinophil count962634446263445Human
407218815GWAS867791_Hasthma exacerbation measurement QTL GWAS867791 (human)3e-10asthma exacerbation measurement963087296308730Human
407149433GWAS798409_Hasthma QTL GWAS798409 (human)4e-11asthma962559676255968Human
407337594GWAS986570_Hhematocrit QTL GWAS986570 (human)2e-09hematocrit962616956261696Human
628441672GWAS2349901_Heosinophil percentage of leukocytes QTL GWAS2349901 (human)3e-11eosinophil quantity (VT:0002602)blood eosinophil count to total leukocyte count ratio (CMO:0000369)962652566265257Human
407309177GWAS958153_Hhemoglobin measurement QTL GWAS958153 (human)3e-09hemoglobin measurement962616956261696Human
628440631GWAS2348860_Hchildhood onset asthma QTL GWAS2348860 (human)1e-10childhood onset asthma962559676255968Human
616953217GWAS1970716_Heosinophil count QTL GWAS1970716 (human)3e-26eosinophil count962634446263445Human
628515891GWAS2424120_HWheezing QTL GWAS2424120 (human)7e-10Wheezing962927986292799Human
617089935GWAS2107434_Hhematocrit QTL GWAS2107434 (human)2e-09hematocrit962616956261696Human
616982913GWAS2000412_Heosinophil percentage of granulocytes QTL GWAS2000412 (human)3e-27eosinophil quantity (VT:0002602)962886046288605Human
616521462GWAS1918045_Heosinophil percentage of leukocytes QTL GWAS1918045 (human)5e-81eosinophil percentage of leukocytes962927986292799Human
628424254GWAS2332483_Hadult onset asthma QTL GWAS2332483 (human)2e-09adult onset asthma962559676255968Human
617041549GWAS2059048_Hserum creatinine amount QTL GWAS2059048 (human)3e-09serum creatinine amount963276906327691Human
617125507GWAS2143006_Heosinophil percentage of leukocytes QTL GWAS2143006 (human)5e-81eosinophil percentage of leukocytes962927986292799Human
628440633GWAS2348862_Hchildhood onset asthma QTL GWAS2348862 (human)6e-14childhood onset asthma962364076236408Human
628814902GWAS2723131_Heosinophil count QTL GWAS2723131 (human)5e-52eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)962927986292799Human
628702772GWAS2611001_Huromodulin measurement QTL GWAS2611001 (human)4e-16uromodulin measurement962847236284724Human
616977814GWAS1995313_Hneutrophil percentage of granulocytes QTL GWAS1995313 (human)8e-23neutrophil quantity (VT:0000222)962886046288605Human
617095067GWAS2112566_Hasthma QTL GWAS2112566 (human)5e-21asthma962559676255968Human
617123739GWAS2141238_Hserum creatinine amount QTL GWAS2141238 (human)9e-15serum creatinine amount962895046289505Human
628821027GWAS2729256_Heosinophil percentage of leukocytes QTL GWAS2729256 (human)5e-81eosinophil quantity (VT:0002602)blood eosinophil count to total leukocyte count ratio (CMO:0000369)962927986292799Human
2315898GLUCO191_HGlucose level QTL 191 (human)1.83Glucose level9528914931289149Human
617106833GWAS2124332_Hasthma QTL GWAS2124332 (human)5e-25asthma962825116282512Human
626441739GWAS2255672_Heosinophil count QTL GWAS2255672 (human)3e-26eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)962634446263445Human
407191322GWAS840298_Hwheezing QTL GWAS840298 (human)7e-10wheezing962927986292799Human
597047030GWAS1143104_Hchildhood onset asthma QTL GWAS1143104 (human)1e-10childhood onset asthma962559676255968Human
407137061GWAS786037_Hasthma, allergic disease QTL GWAS786037 (human)2e-08asthma, allergic disease962330826233083Human
407363361GWAS1012337_Hcreatinine measurement QTL GWAS1012337 (human)3e-09creatinine measurement963276906327691Human
597051643GWAS1147717_Heosinophil count QTL GWAS1147717 (human)1e-56eosinophil count962526906252691Human
628832790GWAS2741019_Hserum creatinine amount QTL GWAS2741019 (human)9e-15serum creatinine amount962895046289505Human
597047032GWAS1143106_Hchildhood onset asthma QTL GWAS1143106 (human)6e-14childhood onset asthma962364076236408Human
628486404GWAS2394633_Hchildhood onset asthma QTL GWAS2394633 (human)3e-08childhood onset asthma962312396231240Human
616505805GWAS1902388_Huromodulin measurement QTL GWAS1902388 (human)4e-16uromodulin measurement962847236284724Human
626444069GWAS2258002_Heosinophil count QTL GWAS2258002 (human)1e-56eosinophil count962526906252691Human
625815614GWAS2236536_Hprostate carcinoma QTL GWAS2236536 (human)2e-08prostate carcinoma962533016253302Human
597427946GWAS1524020_Hurate measurement QTL GWAS1524020 (human)3e-08urate measurement962748926274893Human
616990129GWAS2007628_Hurate measurement QTL GWAS2007628 (human)3e-08urate measurement962748926274893Human
616982462GWAS1999961_Hbasophil count, eosinophil count QTL GWAS1999961 (human)1e-22eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)962645516264552Human
628419853GWAS2328082_Hhemoglobin measurement QTL GWAS2328082 (human)3e-09blood hemoglobin amount (VT:0001588)hemoglobin measurement (CMO:0000508)962624586262459Human
407221052GWAS870028_Heosinophil percentage of leukocytes QTL GWAS870028 (human)3e-11eosinophil percentage of leukocytes962652566265257Human
616517830GWAS1914413_Heosinophil count QTL GWAS1914413 (human)5e-52eosinophil count962927986292799Human
407342393GWAS991369_Herythrocyte count QTL GWAS991369 (human)5e-10erythrocyte count962332216233222Human
628441610GWAS2349839_Heosinophil percentage of leukocytes QTL GWAS2349839 (human)2e-58eosinophil quantity (VT:0002602)blood eosinophil count to total leukocyte count ratio (CMO:0000369)962526906252691Human
616987200GWAS2004699_Hred blood cell density QTL GWAS2004699 (human)2e-22red blood cell density963091886309189Human
407226306GWAS875282_Hbasophil count, eosinophil count QTL GWAS875282 (human)1e-22basophil count, eosinophil count962645516264552Human
406967755GWAS616731_Heosinophil percentage of granulocytes QTL GWAS616731 (human)3e-27eosinophil percentage of granulocytes962886046288605Human
407141835GWAS790811_Hchildhood onset asthma QTL GWAS790811 (human)3e-08childhood onset asthma962312396231240Human
597296405GWAS1392479_Hhematocrit QTL GWAS1392479 (human)2e-09hematocrit962616956261696Human
597045764GWAS1141838_Hhemoglobin measurement QTL GWAS1141838 (human)3e-09hemoglobin measurement962624586262459Human
407036628GWAS685604_Hadult onset asthma QTL GWAS685604 (human)2e-09adult onset asthma962559676255968Human
406943702GWAS592678_Heosinophil percentage of leukocytes QTL GWAS592678 (human)2e-58eosinophil percentage of leukocytes962526906252691Human
628692960GWAS2601189_Herythrocyte count QTL GWAS2601189 (human)5e-10erythrocyte countred blood cell count (CMO:0000025)962332216233222Human
2293433PRSTS223_HProstate tumor susceptibility QTL 223 (human)1.6Prostate tumor susceptibility9528914931289149Human
617114963GWAS2132462_Huromodulin measurement QTL GWAS2132462 (human)4e-16uromodulin measurement962847236284724Human
617011802GWAS2029301_Heosinophil count QTL GWAS2029301 (human)7e-15eosinophil count962955876295588Human
628536555GWAS2444784_Hhematocrit QTL GWAS2444784 (human)2e-09erythrocyte morphology trait (VT:0002447)hematocrit (CMO:0000037)962616956261696Human
616953444GWAS1970943_Heosinophil percentage of leukocytes QTL GWAS1970943 (human)9e-28eosinophil quantity (VT:0002602)blood eosinophil count to total leukocyte count ratio (CMO:0000369)962886046288605Human
617049701GWAS2067200_Heosinophil percentage of leukocytes QTL GWAS2067200 (human)3e-11eosinophil percentage of leukocytes962652566265257Human
597204541GWAS1300615_Hasthma QTL GWAS1300615 (human)4e-18asthma962526906252691Human
407009253GWAS658229_Hhemoglobin measurement QTL GWAS658229 (human)3e-09hemoglobin measurement962624586262459Human
616986998GWAS2004497_Hhemoglobin measurement QTL GWAS2004497 (human)3e-09hemoglobin measurement962624586262459Human
628568007GWAS2476236_Hurate measurement QTL GWAS2476236 (human)3e-08urate measurementblood uric acid level (CMO:0000501)962748926274893Human
597052455GWAS1148529_Hasthma QTL GWAS1148529 (human)4e-11asthma962559676255968Human
597098790GWAS1194864_Hasthma exacerbation measurement QTL GWAS1194864 (human)3e-10asthma exacerbation measurement963087296308730Human
597333550GWAS1429624_Hasthma QTL GWAS1429624 (human)5e-25asthma962825116282512Human
406916598GWAS565574_Hasthma QTL GWAS565574 (human)5e-25asthma962825116282512Human
626444014GWAS2257947_Hobsolete_wheezing QTL GWAS2257947 (human)7e-10obsolete_wheezing962927986292799Human
2293400PRSTS224_HProstate tumor susceptibility QTL 224 (human)1.62Prostate tumor susceptibility9528914931289149Human
597135148GWAS1231222_Hmemory performance QTL GWAS1231222 (human)0.00001learning/memory/conditioning trait (VT:0002063)962363506236351Human
598015256GWAS1734555_Hred blood cell density QTL GWAS1734555 (human)2e-22red blood cell density963091886309189Human
628364215GWAS2285059_HWheezing QTL GWAS2285059 (human)7e-10Wheezing962927986292799Human
407257997GWAS906973_Hasthma QTL GWAS906973 (human)4e-18asthma962526906252691Human
617029910GWAS2047409_Hasthma exacerbation measurement QTL GWAS2047409 (human)3e-10bronchoconstriction trait (VT:0001945)963087296308730Human
597242442GWAS1338516_Hwheezing QTL GWAS1338516 (human)7e-10wheezing962927986292799Human
628860058GWAS2768287_Hasthma QTL GWAS2768287 (human)5e-25asthma962825116282512Human
616987431GWAS2004930_Hatopic asthma QTL GWAS2004930 (human)2e-31atopic asthma963059046305905Human
407022496GWAS671472_Hendometriosis QTL GWAS671472 (human)0.0000009uterus integrity trait (VT:0010575)962535716253572Human
617123371GWAS2140870_Heosinophil count QTL GWAS2140870 (human)5e-52eosinophil count962927986292799Human
628464531GWAS2372760_Hasthma QTL GWAS2372760 (human)4e-18asthma962526906252691Human
407277728GWAS926704_Hasthma QTL GWAS926704 (human)7e-17asthma962559676255968Human
1357299AASTH47_HAllergic/atopic asthma related QTL 47 (human)0.00028Reversible airflow obstruction9528914931289149Human
628622740GWAS2530969_Hasthma, allergic disease QTL GWAS2530969 (human)2e-08asthma, allergic disease962330826233083Human
407148203GWAS797179_Hglycodeoxycholate measurement QTL GWAS797179 (human)0.000005glycodeoxycholate measurement962780716278072Human
407064236GWAS713212_Hred blood cell density measurement QTL GWAS713212 (human)2e-22red blood cell density measurement963091886309189Human
597046118GWAS1142192_Hatopic asthma QTL GWAS1142192 (human)1e-12atopic asthma962526906252691Human
407057073GWAS706049_Heosinophil count QTL GWAS706049 (human)1e-56eosinophil count962526906252691Human
1643245BW137_HBody weight QTL 137 (human)2.28Body weight9528914931289149Human
597304943GWAS1401017_Herythrocyte count QTL GWAS1401017 (human)5e-10erythrocyte count962332216233222Human
616553800GWAS1950383_Herythrocyte count QTL GWAS1950383 (human)2e-13erythrocyte count963179366317937Human
628436620GWAS2344849_Hasthma QTL GWAS2344849 (human)4e-11asthma962559676255968Human
598091101GWAS1810400_Hserum creatinine amount QTL GWAS1810400 (human)3e-09serum creatinine amount963276906327691Human


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_001746613
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3896,280,942 - 6,328,268 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001746614
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3896,228,232 - 6,328,268 (-)NCBI
Sequence:
RefSeq Acc Id: XR_007079896
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.096,285,996 - 6,333,332 (-)NCBI
RefSeq Acc Id: XR_007079897
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.096,233,292 - 6,333,332 (-)NCBI

Additional Information

Database Acc Id Source(s)
COSMIC LOC107987046 COSMIC
GTEx LOC107987046 GTEx
Human Proteome Map LOC107987046 Human Proteome Map
NCBI Gene LOC107987046 ENTREZGENE