LOC105369509 (uncharacterized LOC105369509) - Rat Genome Database

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Gene: LOC105369509 (uncharacterized LOC105369509) Homo sapiens
Analyze
Symbol: LOC105369509
Name: uncharacterized LOC105369509
RGD ID: 38665629
Description:
Type: ncrna
RefSeq Status: VALIDATED
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811115,333,577 - 115,340,439 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3711115,204,296 - 115,211,158 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map11q23.3NCBI
CHM1_111115,087,748 - 115,094,611 (+)NCBICHM1_1
T2T-CHM13v2.011115,346,725 - 115,353,588 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:10737800  


Genomics


Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 11q22.1-25(chr11:100348599-135040246)x3 copy number gain See cases [RCV000053638] Chr11:100348599..135040246 [GRCh38]
Chr11:100219331..134910140 [GRCh37]
Chr11:99724541..134415350 [NCBI36]
Chr11:11q22.1-25		 pathogenic
GRCh38/hg38 11q23.2-25(chr11:112864326-131189315)x3 copy number gain See cases [RCV000137582] Chr11:112864326..131189315 [GRCh38]
Chr11:112832130..131059210 [GRCh37]
Chr11:112240259..130564420 [NCBI36]
Chr11:11q23.2-25		 pathogenic
GRCh38/hg38 11q23.3(chr11:115159099-115463477)x3 copy number gain See cases [RCV000139321] Chr11:115159099..115463477 [GRCh38]
Chr11:115029819..115334196 [GRCh37]
Chr11:114535029..114839406 [NCBI36]
Chr11:11q23.3		 likely benign
GRCh38/hg38 11q23.2-23.3(chr11:113444446-120648921)x3 copy number gain See cases [RCV000050627] Chr11:113444446..120648921 [GRCh38]
Chr11:113315168..120519630 [GRCh37]
Chr11:112820378..120024840 [NCBI36]
Chr11:11q23.2-23.3		 pathogenic
GRCh38/hg38 11q23.3(chr11:115159099-116045030)x3 copy number gain See cases [RCV000051935] Chr11:115159099..116045030 [GRCh38]
Chr11:115029819..115915748 [GRCh37]
Chr11:114535029..115420958 [NCBI36]
Chr11:11q23.3		 uncertain significance

Expression


Sequence


Reference Sequences
RefSeq Acc Id: NR_135108
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811115,333,577 - 115,340,439 (+)NCBI
T2T-CHM13v2.011115,346,725 - 115,353,588 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
COSMIC LOC105369509 COSMIC
GTEx LOC105369509 GTEx
Human Proteome Map LOC105369509 Human Proteome Map
NCBI Gene LOC105369509 ENTREZGENE
RNAcentral URS0000A764FB RNACentral