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Gene: LOC116286205 (CRISPRi-validated cis-regulatory element chr20.846) Homo sapiens
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Symbol: LOC116286205
Name: CRISPRi-validated cis-regulatory element chr20.846
RGD ID: 38647305
Description: This genomic region represents a DNase I hypersensitive site (DHS) that was predicted to be an enhancer by the ENCODE (ENCyclopedia Of DNA Elements) project based on various combinations of H3K27 acetylation and binding of p300, GATA1 and RNA polymerase II in K562 erythroleukemia cells. It was validated as a high-confidence cis-regulatory element for the ID1 (inhibitor of DNA binding 1, HLH protein) gene on chromosome 20 based on multiplex CRISPR/Cas9-mediated perturbation in K562 cells. [provided by RefSeq, Nov 2019]
Type: biological-region
RefSeq Status: REVIEWED
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382031,610,523 - 31,611,121 (+)NCBIGRCh38GRCh38hg38GRCh38
Cytogenetic Map20qNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - uncurated

Genomics


Expression


Sequence

Nucleotide Sequences
Clinical Variants

Additional Information

External Database Links
 
More on LOC116286205
NCBI Gene
Ensembl Gene
JBrowse: hg38
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 38647305
Created: 2020-09-16
Species: Homo sapiens
Last Modified: 2020-09-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.