LOC101928166 (uncharacterized LOC101928166) - Rat Genome Database

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Gene: LOC101928166 (uncharacterized LOC101928166) Homo sapiens
Analyze
Symbol: LOC101928166
Name: uncharacterized LOC101928166
RGD ID: 38611322
Description:
Type: ncrna
RefSeq Status: VALIDATED
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383152,159,464 - 152,205,429 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh373151,877,253 - 151,923,218 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map3q25.1NCBI
HuRef3149,268,492 - 149,314,468 (-)NCBIHuRef
CHM1_13151,840,158 - 151,886,152 (-)NCBICHM1_1
T2T-CHM13v2.03154,927,344 - 154,973,334 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC101928166
3 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 3q25.1-25.2(chr3:151429416-155118646)x1 copy number loss See cases [RCV000141813] Chr3:151429416..155118646 [GRCh38]
Chr3:151147204..154836435 [GRCh37]
Chr3:152629894..156319129 [NCBI36]
Chr3:3q25.1-25.2		 likely pathogenic
GRCh38/hg38 3q24-26.32(chr3:147442566-178522531)x3 copy number gain See cases [RCV000051724] Chr3:147442566..178522531 [GRCh38]
Chr3:147160353..178240319 [GRCh37]
Chr3:148643043..179723013 [NCBI36]
Chr3:3q24-26.32		 pathogenic
GRCh38/hg38 3q24-29(chr3:147521892-198096565)x3 copy number gain See cases [RCV000051725] Chr3:147521892..198096565 [GRCh38]
Chr3:147239679..197823436 [GRCh37]
Chr3:148722369..199307833 [NCBI36]
Chr3:3q24-29		 pathogenic
GRCh38/hg38 3q25.1-29(chr3:152100512-198118383)x3 copy number gain See cases [RCV000139435] Chr3:152100512..198118383 [GRCh38]
Chr3:151818301..197845254 [GRCh37]
Chr3:153300991..199329651 [NCBI36]
Chr3:3q25.1-29		 pathogenic
GRCh38/hg38 3q13.11-29(chr3:103426882-198110178)x3 copy number gain See cases [RCV000134948] Chr3:103426882..198110178 [GRCh38]
Chr3:103145726..197837049 [GRCh37]
Chr3:104628416..199321446 [NCBI36]
Chr3:3q13.11-29		 pathogenic

Expression


Sequence


Reference Sequences
RefSeq Acc Id: NR_136178
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383152,159,464 - 152,205,429 (-)NCBI
T2T-CHM13v2.03154,927,344 - 154,973,334 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
COSMIC LOC101928166 COSMIC
GTEx LOC101928166 GTEx
Human Proteome Map LOC101928166 Human Proteome Map
NCBI Gene LOC101928166 ENTREZGENE
RNAcentral URS0000A31539 RNACentral