LINC03021 (long intergenic non-protein coding RNA 3021) - Rat Genome Database

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Gene: LINC03021 (long intergenic non-protein coding RNA 3021) Homo sapiens
Analyze
Symbol: LINC03021
Name: long intergenic non-protein coding RNA 3021
RGD ID: 38609657
HGNC Page HGNC:56149
Description: ASSOCIATED WITH Schizophrenia; schizophrenia
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: AC245123.1; AC246817.2; LOC101927815; novel transcript; uncharacterized LOC101927815
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3882,530,092 - 2,728,451 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl82,562,813 - 2,623,382 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p14 Ensembl82,648,075 - 2,728,577 (-)EnsemblGRCh38hg38GRCh38
GRCh3782,387,219 - 2,585,991 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map8p23.2NCBI
CHM1_182,536,105 - 2,569,485 (-)NCBICHM1_1
T2T-CHM13v2.082,283,639 - 2,482,124 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
schizophrenia  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Schizophrenia  (IAGP)
References
Additional References at PubMed
PMID:12477932   PMID:14702039   PMID:16344560  


Genomics

Variants

.
Variants in LINC03021
6 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 8p23.3-23.2(chr8:1891352-3929104)x1 copy number loss See cases [RCV000052748] Chr8:1891352..3929104 [GRCh38]
Chr8:1839518..3786626 [GRCh37]
Chr8:1826925..3774034 [NCBI36]
Chr8:8p23.3-23.2		 uncertain significance
GRCh38/hg38 8p23.2(chr8:2605460-3989878)x1 copy number loss See cases [RCV000052749] Chr8:2605460..3989878 [GRCh38]
Chr8:2498609..3847400 [GRCh37]
Chr8:2357047..3834808 [NCBI36]
Chr8:8p23.2		 uncertain significance
GRCh38/hg38 8p23.2(chr8:2641113-3269970)x3 copy number gain See cases [RCV000148190] Chr8:2641113..3269970 [GRCh38]
Chr8:2498609..3127492 [GRCh37]
Chr8:2464272..3114899 [NCBI36]
Chr8:8p23.2		 uncertain significance
GRCh38/hg38 8p23.2(chr8:2475295-3082171)x3 copy number gain See cases [RCV000050692] Chr8:2475295..3082171 [GRCh38]
Chr8:2308926..2939693 [GRCh37]
Chr8:2296333..2927100 [NCBI36]
Chr8:8p23.2		 uncertain significance
GRCh38/hg38 8p23.3-23.2(chr8:241530-3701826)x1 copy number loss See cases [RCV000054220] Chr8:241530..3701826 [GRCh38]
Chr8:191530..3559348 [GRCh37]
Chr8:181530..3546756 [NCBI36]
Chr8:8p23.3-23.2		 pathogenic
GRCh38/hg38 8p23.3-12(chr8:241605-31091074)x3 copy number gain See cases [RCV000138831] Chr8:241605..31091074 [GRCh38]
Chr8:191605..30948590 [GRCh37]
Chr8:181605..31068132 [NCBI36]
Chr8:8p23.3-12		 pathogenic
GRCh38/hg38 8p23.3-23.2(chr8:226452-3189683)x1 copy number loss See cases [RCV000137258] Chr8:226452..3189683 [GRCh38]
Chr8:176452..3047205 [GRCh37]
Chr8:166452..3034612 [NCBI36]
Chr8:8p23.3-23.2		 likely pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3 copy number gain See cases [RCV000142858] Chr8:226452..145068712 [GRCh38]
Chr8:176452..146294098 [GRCh37]
Chr8:166452..146264902 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p23.2-23.1(chr8:2605460-6605579)x3 copy number gain See cases [RCV000139540] Chr8:2605460..6605579 [GRCh38]
Chr8:2498609..6463100 [GRCh37]
Chr8:2421129..6450508 [NCBI36]
Chr8:8p23.2-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.2(chr8:241530-3331813)x1 copy number loss See cases [RCV000136737] Chr8:241530..3331813 [GRCh38]
Chr8:191530..3189335 [GRCh37]
Chr8:181530..3176742 [NCBI36]
Chr8:8p23.3-23.2		 pathogenic
GRCh38/hg38 8p23.3-23.2(chr8:208048-5615542)x1 copy number loss See cases [RCV000143654] Chr8:208048..5615542 [GRCh38]
Chr8:158048..5473064 [GRCh37]
Chr8:148048..5460472 [NCBI36]
Chr8:8p23.3-23.2		 likely pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:208048-7124466)x1 copy number loss See cases [RCV000140443] Chr8:208048..7124466 [GRCh38]
Chr8:158048..6981988 [GRCh37]
Chr8:148048..6969398 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241530-10191595)x1 copy number loss See cases [RCV000134879] Chr8:241530..10191595 [GRCh38]
Chr8:191530..10049105 [GRCh37]
Chr8:181530..10086515 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.2(chr8:2605460-2936937)x3 copy number gain See cases [RCV000136308] Chr8:2605460..2936937 [GRCh38]
Chr8:2498609..2794459 [GRCh37]
Chr8:2337312..2781866 [NCBI36]
Chr8:8p23.2		 uncertain significance
GRCh38/hg38 8p23.3-23.1(chr8:208048-7186524)x4 copy number gain See cases [RCV000143758] Chr8:208048..7186524 [GRCh38]
Chr8:158048..7044046 [GRCh37]
Chr8:148048..7031456 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:208048-7141592)x1 copy number loss See cases [RCV000139890] Chr8:208048..7141592 [GRCh38]
Chr8:158048..6999114 [GRCh37]
Chr8:148048..6986524 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:226452-12712987)x3 copy number gain See cases [RCV000137984] Chr8:226452..12712987 [GRCh38]
Chr8:176452..12570496 [GRCh37]
Chr8:166452..12614867 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.2(chr8:2475295-3055688)x3 copy number gain See cases [RCV000139103] Chr8:2475295..3055688 [GRCh38]
Chr8:2292235..2913210 [GRCh37]
Chr8:2171536..2900617 [NCBI36]
Chr8:8p23.3-23.2		 likely benign
GRCh38/hg38 8p23.3-12(chr8:96310-30614703)x3 copy number gain See cases [RCV000053599] Chr8:96310..30614703 [GRCh38]
Chr8:46310..30472220 [GRCh37]
Chr8:36310..30591762 [NCBI36]
Chr8:8p23.3-12		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:219853-10165486)x3 copy number gain See cases [RCV000053601] Chr8:219853..10165486 [GRCh38]
Chr8:169853..10022996 [GRCh37]
Chr8:159853..10060406 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241605-7022824)x3 copy number gain See cases [RCV000135993] Chr8:241605..7022824 [GRCh38]
Chr8:191605..6880346 [GRCh37]
Chr8:181605..6867756 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241605-7022824)x1 copy number loss See cases [RCV000135994] Chr8:241605..7022824 [GRCh38]
Chr8:191605..6880346 [GRCh37]
Chr8:181605..6867756 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241530-7056554)x1 copy number loss See cases [RCV000136824] Chr8:241530..7056554 [GRCh38]
Chr8:191530..6914076 [GRCh37]
Chr8:181530..6901486 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:96310-12021806)x3 copy number gain See cases [RCV000053600] Chr8:96310..12021806 [GRCh38]
Chr8:46310..11879315 [GRCh37]
Chr8:36310..11916724 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:208048-7141698)x3 copy number gain See cases [RCV000143378] Chr8:208048..7141698 [GRCh38]
Chr8:158048..6999220 [GRCh37]
Chr8:148048..6986630 [NCBI36]
Chr8:8p23.3-23.1		 uncertain significance
GRCh38/hg38 8p23.3-23.2(chr8:226452-4316172)x1 copy number loss See cases [RCV000142811] Chr8:226452..4316172 [GRCh38]
Chr8:176452..4173694 [GRCh37]
Chr8:166452..4161102 [NCBI36]
Chr8:8p23.3-23.2		 uncertain significance
GRCh38/hg38 8p23.3-23.1(chr8:226452-7981437)x3 copy number gain See cases [RCV000138228] Chr8:226452..7981437 [GRCh38]
Chr8:176452..7838959 [GRCh37]
Chr8:166452..7876369 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic|likely benign
GRCh38/hg38 8p23.3-23.1(chr8:782690-8222398)x3 copy number gain See cases [RCV000137206] Chr8:782690..8222398 [GRCh38]
Chr8:732690..8079920 [GRCh37]
Chr8:722690..8117330 [NCBI36]
Chr8:8p23.3-23.1		 benign
GRCh38/hg38 8p23.3-23.2(chr8:219853-3814398)x1 copy number loss See cases [RCV000054205] Chr8:219853..3814398 [GRCh38]
Chr8:169853..3671920 [GRCh37]
Chr8:159853..3659328 [NCBI36]
Chr8:8p23.3-23.2		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:226452-7062751)x1 copy number loss See cases [RCV000139342] Chr8:226452..7062751 [GRCh38]
Chr8:176452..6920273 [GRCh37]
Chr8:166452..6907683 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241530-7895064)x1 copy number loss See cases [RCV000148253] Chr8:241530..7895064 [GRCh38]
Chr8:191530..7752586 [GRCh37]
Chr8:181530..7789996 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic|likely pathogenic
GRCh38/hg38 8p23.2(chr8:2605460-4821349)x3 copy number gain See cases [RCV000138451] Chr8:2605460..4821349 [GRCh38]
Chr8:2498609..4678871 [GRCh37]
Chr8:2421129..4666279 [NCBI36]
Chr8:8p23.2		 likely benign
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3 copy number gain See cases [RCV000138643] Chr8:241605..145054781 [GRCh38]
Chr8:191605..146280167 [GRCh37]
Chr8:181605..146250971 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p23.3-21.1(chr8:2475295-27504279)x1 copy number loss See cases [RCV000050297] Chr8:2475295..27504279 [GRCh38]
Chr8:2292235..27361796 [GRCh37]
Chr8:2121457..27417713 [NCBI36]
Chr8:8p23.3-21.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:226452-12698554)x3 copy number gain See cases [RCV000143248] Chr8:226452..12698554 [GRCh38]
Chr8:176452..12556063 [GRCh37]
Chr8:166452..12600434 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.2(chr8:2641113-3321965)x3 copy number gain See cases [RCV000138666] Chr8:2641113..3321965 [GRCh38]
Chr8:2498609..3179487 [GRCh37]
Chr8:2474700..3166894 [NCBI36]
Chr8:8p23.2		 uncertain significance
GRCh38/hg38 8p23.3-23.1(chr8:241530-7022841)x1 copy number loss See cases [RCV000050427] Chr8:241530..7022841 [GRCh38]
Chr8:191530..6880363 [GRCh37]
Chr8:181530..6867773 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters
GRCh38/hg38 8p23.3-23.2(chr8:226452-2767932)x1 copy number loss See cases [RCV000139034] Chr8:226452..2767932 [GRCh38]
Chr8:176452..2625470 [GRCh37]
Chr8:166452..2612877 [NCBI36]
Chr8:8p23.3-23.2		 likely pathogenic|uncertain significance
GRCh38/hg38 8p23.3-21.2(chr8:241605-24656971)x3 copy number gain See cases [RCV000136026] Chr8:241605..24656971 [GRCh38]
Chr8:191605..24514484 [GRCh37]
Chr8:181605..24570374 [NCBI36]
Chr8:8p23.3-21.2		 pathogenic
GRCh38/hg38 8p23.3-22(chr8:241530-17678697)x3 copy number gain See cases [RCV000053603] Chr8:241530..17678697 [GRCh38]
Chr8:191530..17536206 [GRCh37]
Chr8:181530..17580486 [NCBI36]
Chr8:8p23.3-22		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000053602] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p23.3-11.23(chr8:226452-38021728)x3 copy number gain See cases [RCV000137807] Chr8:226452..38021728 [GRCh38]
Chr8:176452..37879246 [GRCh37]
Chr8:166452..37998403 [NCBI36]
Chr8:8p23.3-11.23		 pathogenic|likely pathogenic
GRCh38/hg38 8p23.3-21.3(chr8:241530-23198398)x3 copy number gain See cases [RCV000135967] Chr8:241530..23198398 [GRCh38]
Chr8:191530..23055911 [GRCh37]
Chr8:181530..23111856 [NCBI36]
Chr8:8p23.3-21.3		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:208048-7087252)x1 copy number loss See cases [RCV000143507] Chr8:208048..7087252 [GRCh38]
Chr8:158048..6944774 [GRCh37]
Chr8:148048..6932184 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.2(chr8:2475295-3393436)x3 copy number gain See cases [RCV000137678] Chr8:2475295..3393436 [GRCh38]
Chr8:2292235..3250958 [GRCh37]
Chr8:2145922..3238365 [NCBI36]
Chr8:8p23.3-23.2		 likely pathogenic|uncertain significance
GRCh38/hg38 8p23.2-21.1(chr8:2475295-27504279)x1 copy number loss See cases [RCV000148252] Chr8:2475295..27504279 [GRCh38]
Chr8:2292235..27361796 [GRCh37]
Chr8:2121457..27417713 [NCBI36]
Chr8:8p23.2-21.1		 pathogenic
GRCh38/hg38 8p23.2(chr8:2605460-3036751)x3 copy number gain See cases [RCV000139267] Chr8:2605460..3036751 [GRCh38]
Chr8:2498609..2894273 [GRCh37]
Chr8:2421129..2881680 [NCBI36]
Chr8:8p23.2		 benign
GRCh38/hg38 8p23.3-23.1(chr8:226452-7084815)x1 copy number loss See cases [RCV000139442] Chr8:226452..7084815 [GRCh38]
Chr8:176452..6942337 [GRCh37]
Chr8:166452..6929747 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3 copy number gain See cases [RCV000051206] Chr8:241530..145049449 [GRCh38]
Chr8:191530..146274835 [GRCh37]
Chr8:181530..146245639 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p23.2(chr8:2475295-3131009)x3 copy number gain See cases [RCV000143771] Chr8:2475295..3131009 [GRCh38]
Chr8:2330753..2988531 [GRCh37]
Chr8:2318160..2975938 [NCBI36]
Chr8:8p23.2		 likely benign
GRCh38/hg38 8p23.3-23.1(chr8:241530-7895064)x3 copy number gain See cases [RCV000050620] Chr8:241530..7895064 [GRCh38]
Chr8:191530..7752586 [GRCh37]
Chr8:181530..7789996 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241530-7895064)x1 copy number loss See cases [RCV000050621] Chr8:241530..7895064 [GRCh38]
Chr8:191530..7752586 [GRCh37]
Chr8:181530..7789996 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic|uncertain significance|conflicting data from submitters
GRCh38/hg38 8p23.3-23.1(chr8:241530-7195723)x1 copy number loss See cases [RCV000054219] Chr8:241530..7195723 [GRCh38]
Chr8:191530..7053245 [GRCh37]
Chr8:181530..7040655 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.2(chr8:2641113-3269970)x3 copy number gain See cases [RCV000050842] Chr8:2641113..3269970 [GRCh38]
Chr8:2498609..3127492 [GRCh37]
Chr8:2464272..3114899 [NCBI36]
Chr8:8p23.2		 uncertain significance
GRCh38/hg38 8p23.3-23.1(chr8:219853-7084815)x1 copy number loss See cases [RCV000054206] Chr8:219853..7084815 [GRCh38]
Chr8:169853..6942337 [GRCh37]
Chr8:159853..6929747 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241530-10458484)x1 copy number loss See cases [RCV000142596] Chr8:241530..10458484 [GRCh38]
Chr8:191530..10315994 [GRCh37]
Chr8:181530..10353404 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic|likely pathogenic
GRCh37/hg19 8p23.2(chr8:2349876-2559272)x3 copy number gain See cases [RCV000135069] Chr8:2349876..2559272 [GRCh37]
Chr8:2337283..2546679 [NCBI36]
Chr8:8p23.2		 benign
GRCh38/hg38 8p23.3-22(chr8:226452-16280146)x3 copy number gain See cases [RCV000141418] Chr8:226452..16280146 [GRCh38]
Chr8:176452..16137655 [GRCh37]
Chr8:166452..16182026 [NCBI36]
Chr8:8p23.3-22		 pathogenic
GRCh38/hg38 8p23.2-23.1(chr8:2605460-7026475)x3 copy number gain See cases [RCV000140846] Chr8:2605460..7026475 [GRCh38]
Chr8:2498609..6883997 [GRCh37]
Chr8:2393844..6871407 [NCBI36]
Chr8:8p23.2-23.1		 uncertain significance
GRCh38/hg38 8p23.2(chr8:2605460-3270586)x3 copy number gain See cases [RCV000140890] Chr8:2605460..3270586 [GRCh38]
Chr8:2460347..3128108 [GRCh37]
Chr8:2447754..3115515 [NCBI36]
Chr8:8p23.2		 uncertain significance
GRCh38/hg38 8p23.2(chr8:2605460-3988766)x3 copy number gain See cases [RCV000135572] Chr8:2605460..3988766 [GRCh38]
Chr8:2498609..3846288 [GRCh37]
Chr8:2421131..3833696 [NCBI36]
Chr8:8p23.2		 uncertain significance
GRCh38/hg38 8p23.3-23.1(chr8:410369-7477103)x1 copy number loss See cases [RCV000135293] Chr8:410369..7477103 [GRCh38]
Chr8:360369..7334625 [GRCh37]
Chr8:350369..7322035 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241530-7022841)x3 copy number gain See cases [RCV000135437] Chr8:241530..7022841 [GRCh38]
Chr8:191530..6880363 [GRCh37]
Chr8:181530..6867773 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241530-10867132)x1 copy number loss See cases [RCV000135534] Chr8:241530..10867132 [GRCh38]
Chr8:191530..10724642 [GRCh37]
Chr8:181530..10762052 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic
GRCh37/hg19 8p23.2(chr8:2256252-2598857)x3 copy number gain See cases [RCV000140827] Chr8:2256252..2598857 [GRCh37]
Chr8:2243659..2586264 [NCBI36]
Chr8:8p23.2		 benign
GRCh38/hg38 8p23.3-23.2(chr8:2475295-3391665)x3 copy number gain See cases [RCV000052131] Chr8:2475295..3391665 [GRCh38]
Chr8:2292235..3249187 [GRCh37]
Chr8:2181922..3236594 [NCBI36]
Chr8:8p23.3-23.2		 uncertain significance
GRCh38/hg38 8p23.3-12(chr8:226452-34491890)x3 copy number gain See cases [RCV000141410] Chr8:226452..34491890 [GRCh38]
Chr8:176452..34349408 [GRCh37]
Chr8:166452..34468950 [NCBI36]
Chr8:8p23.3-12		 pathogenic
GRCh38/hg38 8p23.3-23.2(chr8:241530-3212774)x1 copy number loss See cases [RCV000134919] Chr8:241530..3212774 [GRCh38]
Chr8:191530..3070296 [GRCh37]
Chr8:181530..3057703 [NCBI36]
Chr8:8p23.3-23.2		 pathogenic
NC_000008.11:g.(?_2724493)_(4921893_?)del deletion Schizophrenia [RCV000754339] Chr8:2724493..4921893 [GRCh38]
Chr8:8p23.2		 likely pathogenic
GRCh38/hg38 8p23.3-21.2(chr8:449893-23854904)x1 copy number loss Neurodevelopmental disorder [RCV003327729] Chr8:449893..23854904 [GRCh38]
Chr8:8p23.3-21.2		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3 copy number gain See cases [RCV000141808] Chr8:208048..145070385 [GRCh38]
Chr8:158048..146295771 [GRCh37]
Chr8:148048..146266575 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p23.3-23.1(chr8:241530-7022841)x1 copy number loss See cases [RCV000148128] Chr8:241530..7022841 [GRCh38]
Chr8:191530..6880363 [GRCh37]
Chr8:181530..6867773 [NCBI36]
Chr8:8p23.3-23.1		 pathogenic

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NR_125423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_125425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_125426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA929006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC104021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC245123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC245187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC246817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK128880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC045738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA263654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA774838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA782209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY121738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF458663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000517357
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,669,802 - 2,728,419 (-)Ensembl
RefSeq Acc Id: ENST00000517984
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,669,483 - 2,728,427 (-)Ensembl
RefSeq Acc Id: ENST00000519393
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,666,027 - 2,728,452 (-)Ensembl
RefSeq Acc Id: ENST00000520570
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,700,423 - 2,728,462 (-)Ensembl
RefSeq Acc Id: ENST00000520842
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,696,552 - 2,728,494 (-)Ensembl
RefSeq Acc Id: ENST00000523971
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,666,079 - 2,728,451 (-)Ensembl
RefSeq Acc Id: ENST00000612422
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,589,985 - 2,623,382 (-)Ensembl
RefSeq Acc Id: ENST00000618928
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,589,985 - 2,623,365 (-)Ensembl
RefSeq Acc Id: ENST00000654513
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,700,303 - 2,728,446 (-)Ensembl
RefSeq Acc Id: ENST00000654884
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,648,075 - 2,728,434 (-)Ensembl
RefSeq Acc Id: ENST00000655416
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,665,815 - 2,728,432 (-)Ensembl
RefSeq Acc Id: ENST00000655522
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,719,257 - 2,728,450 (-)Ensembl
RefSeq Acc Id: ENST00000656311
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,562,813 - 2,623,370 (-)Ensembl
RefSeq Acc Id: ENST00000658181
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,673,502 - 2,728,432 (-)Ensembl
RefSeq Acc Id: ENST00000659324
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,662,195 - 2,728,418 (-)Ensembl
RefSeq Acc Id: ENST00000664965
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,712,060 - 2,728,428 (-)Ensembl
RefSeq Acc Id: ENST00000665048
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,673,504 - 2,728,417 (-)Ensembl
RefSeq Acc Id: ENST00000666066
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,665,968 - 2,728,386 (-)Ensembl
RefSeq Acc Id: ENST00000671533
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl82,696,550 - 2,728,577 (-)Ensembl
RefSeq Acc Id: NR_125423
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3882,589,985 - 2,623,365 (-)NCBI
T2T-CHM13v2.082,343,552 - 2,376,932 (-)NCBI
Sequence:
RefSeq Acc Id: NR_125425
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3882,530,092 - 2,728,451 (-)NCBI
T2T-CHM13v2.082,283,639 - 2,482,124 (-)NCBI
Sequence:
RefSeq Acc Id: NR_125426
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3882,696,553 - 2,728,451 (-)NCBI
T2T-CHM13v2.082,450,144 - 2,482,124 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
COSMIC LINC03021 COSMIC
Ensembl Genes ENSG00000254319 Ensembl, ENTREZGENE
  ENSG00000277526 Ensembl
Ensembl Transcript ENST00000520842 ENTREZGENE
GTEx ENSG00000254319 GTEx
  ENSG00000277526 GTEx
HGNC ID HGNC:56149 ENTREZGENE
Human Proteome Map LINC03021 Human Proteome Map
NCBI Gene LOC101927815 ENTREZGENE
RNAcentral URS0000062866 RNACentral
  URS00007E3B3C RNACentral
  URS00007E3EBD RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-07 LINC03021  long intergenic non-protein coding RNA 3021  AC246817.2  novel transcript  Data merged from RGD:16560186 737654 PROVISIONAL
2022-06-07 LINC03021  long intergenic non-protein coding RNA 3021  AC245123.1  novel transcript  Data merged from RGD:16568237 737654 PROVISIONAL
2022-01-17 LINC03021  long intergenic non-protein coding RNA 3021  LOC101927815  uncharacterized LOC101927815  Symbol and/or name change 19259463 PROVISIONAL