LOC414300 (uncharacterized LOC414300) - Rat Genome Database

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Gene: LOC414300 (uncharacterized LOC414300) Homo sapiens
Analyze
Symbol: LOC414300
Name: uncharacterized LOC414300
RGD ID: 38603378
Description:
Type: ncrna
RefSeq Status: VALIDATED
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812105,102,472 - 105,107,642 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3712105,496,250 - 105,501,420 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map12q23.3NCBI
CHM1_112105,461,904 - 105,467,096 (-)NCBICHM1_1
T2T-CHM13v2.012105,064,289 - 105,069,461 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:12477932  


Genomics


Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 12q21.33-24.11(chr12:91044318-109133210)x3 copy number gain See cases [RCV000142447] Chr12:91044318..109133210 [GRCh38]
Chr12:91438095..109571015 [GRCh37]
Chr12:89962226..108055398 [NCBI36]
Chr12:12q21.33-24.11		 pathogenic
GRCh38/hg38 12q23.3(chr12:104550262-106565399)x1 copy number loss See cases [RCV000053281] Chr12:104550262..106565399 [GRCh38]
Chr12:104944040..106959177 [GRCh37]
Chr12:103468170..105483307 [NCBI36]
Chr12:12q23.3		 uncertain significance
GRCh38/hg38 12q23.1-23.3(chr12:100670616-108583607)x1 copy number loss See cases [RCV000051320] Chr12:100670616..108583607 [GRCh38]
Chr12:101064394..108977383 [GRCh37]
Chr12:99588525..107501512 [NCBI36]
Chr12:12q23.1-23.3		 pathogenic
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 copy number gain See cases [RCV000139555] Chr12:121271..133196807 [GRCh38]
Chr12:282465..133773393 [GRCh37]
Chr12:100698..132283466 [NCBI36]
Chr12:12p13.33-q24.33		 pathogenic

Expression


Sequence


Reference Sequences
RefSeq Acc Id: NR_121211
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812105,102,472 - 105,107,642 (-)NCBI
T2T-CHM13v2.012105,064,289 - 105,069,461 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
COSMIC LOC414300 COSMIC
GTEx LOC414300 GTEx
Human Proteome Map LOC414300 Human Proteome Map
NCBI Gene LOC414300 ENTREZGENE
RNAcentral URS000075CD44 RNACentral