Tcrb (T-cell receptor beta chain) - Rat Genome Database

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Gene: Tcrb (T-cell receptor beta chain) Rattus norvegicus
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Symbol: Tcrb
Name: T-cell receptor beta chain
RGD ID: 3834
Description: INVOLVED IN cellular defense response
Type: protein-coding
Also known as: MGC108929; MGC109620; MGC116333; RATTCB; RATTCBC1; T-cell receptor beta cluster; T-cell receptor, beta cluster; TCB; TCBC1; variable region-beta 8.5
Is Marker For: Strains:   WF.BBDR-(D4Rat93-D4Rat228)/Wor  
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
RGSC_v3.1469,081,805 - 69,511,069 (+)NCBI
Cytogenetic Map4q22NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

Additional References at PubMed
PMID:1702803   PMID:12477932   PMID:15383583   PMID:17376830   PMID:19205800   PMID:34205929  


Genomics

Candidate Gene Status
Tcrb is a candidate Gene for QTL Eau1
Tcrb is a candidate Gene for QTL Scwia1
Tcrb is a candidate Gene for QTL Aia3
Position Markers
D4Mit4   No map positions available.
D4Arb12  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2470,411,222 - 70,411,406 (+)MAPPERmRatBN7.2
Rnor_6.0470,822,505 - 70,822,688NCBIRnor6.0
Rnor_5.04135,612,869 - 135,613,052UniSTSRnor5.0
RGSC_v3.4469,235,630 - 69,235,813UniSTSRGSC3.4
Celera465,376,264 - 65,376,447UniSTS
Cytogenetic Map4q22UniSTS
Tcrb-C  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2470,417,960 - 70,418,727 (+)MAPPERmRatBN7.2
Rnor_6.0470,829,243 - 70,830,009NCBIRnor6.0
Rnor_5.04135,619,607 - 135,620,373UniSTSRnor5.0
RGSC_v3.4469,242,368 - 69,243,134UniSTSRGSC3.4
Celera465,383,002 - 65,383,768UniSTS
Cytogenetic Map4q22UniSTS


Related Rat Strains
The following Strains have been annotated to Tcrb


Expression


Sequence



Additional Information

Database Acc Id Source(s)
IMAGE_CLONE IMAGE:7367078 IMAGE-MGC_LOAD
  IMAGE:7380746 IMAGE-MGC_LOAD
  IMAGE:7382105 IMAGE-MGC_LOAD
  IMAGE:7382821 IMAGE-MGC_LOAD
  IMAGE:7383431 IMAGE-MGC_LOAD
MGC_CLONE MGC:108929 IMAGE-MGC_LOAD
  MGC:109620 IMAGE-MGC_LOAD
  MGC:116333 IMAGE-MGC_LOAD
  MGC:125003 IMAGE-MGC_LOAD
  MGC:188284 IMAGE-MGC_LOAD
NCBI Gene 24820 ENTREZGENE
PhenoGen Tcrb PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2003-04-09 Tcrb  T-cell receptor beta chain    T-cell receptor, beta cluster  Name updated 629478 APPROVED
2002-06-10 Tcrb  T-cell receptor, beta cluster      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_domains the hypervariable region 4 mediates binding of SAg to the P-chain of the TCR 724766