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Gene: Syt2 (synaptotagmin 2) Rattus norvegicus
Symbol: Syt2
Name: synaptotagmin 2
Description: Exhibits calcium-dependent phospholipid binding activity and syntaxin binding activity. Predicted to be involved in several processes, including positive regulation of dendrite extension; regulation of secretion by cell; and synaptic vesicle cycle. Localizes to the integral component of synaptic vesicle membrane. Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 7. Orthologous to human SYT2 (synaptotagmin 2); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: RATSYNII; synaptotagmin II; synaptotagmin-2; SYNII; sytII
Homo sapiens (human) : SYT2 (synaptotagmin 2)  HGNC  Alliance
Mus musculus (house mouse) : Syt2 (synaptotagmin II)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syt2 (synaptotagmin 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SYT2 (synaptotagmin 2)
Canis lupus familiaris (dog) : SYT2 (synaptotagmin 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syt2 (synaptotagmin 2)
Sus scrofa (pig) : SYT2 (synaptotagmin 2)
Chlorocebus sabaeus (African green monkey) : SYT2 (synaptotagmin 2)
Heterocephalus glaber (naked mole-rat) : Syt2 (synaptotagmin 2)
more info ...
Is Marker For: Strains:   SS.SR-(Syt2-D13Mit1)/Jr  
QTLs:   Thym2   Bp159  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01351,569,248 - 51,577,824 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1351,534,025 - 51,578,052 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01356,621,954 - 56,630,530 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41347,690,518 - 47,699,094 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11347,704,560 - 47,713,137 (+)NCBI
Celera1346,512,022 - 46,520,623 (+)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Syt2
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3804
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.