Gene: Syp (synaptophysin) Rattus norvegicus
Symbol: Syp
Name: synaptophysin
Description: ENCODES a protein that exhibits protein domain specific binding; protein-containing complex binding; syntaxin-1 binding; INVOLVED IN endocytosis; regulation of opioid receptor signaling pathway; response to amyloid-beta; ASSOCIATED WITH Alzheimer Disease; Abnormalities, Multiple (ortholog); ceroid lipofuscinosis, neuronal 1 (ortholog); FOUND IN excitatory synapse; integral component of synaptic vesicle membrane; intracellular organelle; INTERACTS WITH (+)-pilocarpine; (S)-amphetamine; 5-(1,4-diazepane-1-sulfonyl)isoquinoline
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: major synaptic vesicle protein p38; Syp1
Homo sapiens (human) : SYP (synaptophysin)  HGNC  Alliance
Mus musculus (house mouse) : Syp (synaptophysin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syp (synaptophysin)
Pan paniscus (bonobo/pygmy chimpanzee) : SYP (synaptophysin)
Canis lupus familiaris (dog) : SYP (synaptophysin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syp (synaptophysin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0X15,694,699 - 15,709,244 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X16,485,963 - 16,501,050 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X26,890,307 - 26,905,319 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X26,943,775 - 26,958,788 (-)NCBI
CeleraX14,932,808 - 14,947,852 (-)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Syp
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3802
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2018-03-13
Status: ACTIVE