Gene: Syp (synaptophysin) Rattus norvegicus
Analyze
Symbol: Syp
Name: synaptophysin
Description: ENCODES a protein that exhibits protein domain specific binding; protein-containing complex binding; SNARE binding; INVOLVED IN endocytosis; regulation of opioid receptor signaling pathway; response to amyloid-beta; ASSOCIATED WITH Alzheimer's disease; autistic disorder (ortholog); genetic disease (ortholog); FOUND IN excitatory synapse; integral component of synaptic vesicle membrane; intracellular organelle; INTERACTS WITH (+)-pilocarpine; (S)-amphetamine; 5-(1,4-diazepane-1-sulfonyl)isoquinoline
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: major synaptic vesicle protein p38; Syp1
Orthologs:
Homo sapiens (human) : SYP (synaptophysin)  HGNC  Alliance
Mus musculus (house mouse) : Syp (synaptophysin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syp (synaptophysin)
Pan paniscus (bonobo/pygmy chimpanzee) : SYP (synaptophysin)
Canis lupus familiaris (dog) : SYP (synaptophysin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syp (synaptophysin)
Sus scrofa (pig) : SYP (synaptophysin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X15,694,699 - 15,709,244 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X16,485,963 - 16,501,050 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X26,890,307 - 26,905,319 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X26,943,775 - 26,958,788 (-)NCBI
CeleraX14,932,808 - 14,947,852 (-)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Syp
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3802
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-02-05
Status: ACTIVE