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Gene: Tagln (transgelin) Rattus norvegicus
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Symbol: Tagln
Name: transgelin
Description: Predicted to have actin filament binding activity and protein binding activity, bridging. Predicted to be involved in epithelial cell differentiation. Predicted to localize to the cytoplasm. Orthologous to human TAGLN (transgelin); PARTICIPATES IN platelet-derived growth factor signaling pathway; INTERACTS WITH (RS)-amphetamine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1-naphthyl isothiocyanate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: see also D8Mcw1; Sm22; SM22-alpha; smooth muscle 22 protein; smooth muscle protein 22-alpha; Transgelin (Smooth muscle 22 protein)
Orthologs:
Homo sapiens (human) : TAGLN (transgelin)  HGNC  Alliance
Mus musculus (house mouse) : Tagln (transgelin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tagln (transgelin)
Pan paniscus (bonobo/pygmy chimpanzee) : TAGLN (transgelin)
Canis lupus familiaris (dog) : TAGLN (transgelin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tagln (transgelin)
Sus scrofa (pig) : TAGLN (transgelin)
more info ...
Is Marker For: Strains:   SHRSP-Tg(Tagln-ACE2)6918Bdr  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0850,222,895 - 50,228,369 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0848,847,354 - 48,853,081 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4848,902,208 - 48,907,682 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1848,910,973 - 48,916,459 (-)NCBI
Celera845,807,491 - 45,812,962 (-)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Tagln
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3723
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.