Gene: Srsf5 (serine and arginine rich splicing factor 5) Rattus norvegicus
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Symbol: Srsf5
Name: serine and arginine rich splicing factor 5
Description: Exhibits RNA binding activity and protein kinase B binding activity; involved in several processes, including cellular response to insulin stimulus, liver regeneration, and positive regulation of RNA splicing; localizes to the nucleus; orthologous to human SRSF5 (serine and arginine rich splicing factor 5); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 3-chloropropane-1,2-diol; 3H-1,2-dithiole-3-thione; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: delayed-early protein HRS; HRS; insulin-induced growth response protein CL-4; pre-mRNA-splicing factor SRP40; serine/arginine-rich splicing factor 5; Sfrs5; splicing factor arginine/serine-rich 5 (SRp40 HRS); splicing factor, arginine/serine-rich 5; splicing factor, arginine/serine-rich 5 (SRp40, HRS); SRp40
Orthologs:
Homo sapiens (human) : SRSF5 (serine and arginine rich splicing factor 5)  HGNC  Alliance
Mus musculus (house mouse) : Srsf5 (serine/arginine-rich splicing factor 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Srsf5 (serine and arginine rich splicing factor 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SRSF5 (serine and arginine rich splicing factor 5)
Canis lupus familiaris (dog) : SRSF5 (serine and arginine rich splicing factor 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Srsf5 (serine and arginine rich splicing factor 5)
Sus scrofa (pig) : SRSF5 (serine and arginine rich splicing factor 5)
more info ...
Related Pseudogenes: LOC107305674  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: Due to a potential assembly artifact, Rattus norvegicus Annotation Release 105 annotates the 5' end of this gene on chromosome 6 (NW_007905843.1) and the 3' end on chromosome 17 (NW_007906018.1) on Rnor_6.0. The correct location of this gene is on chromosome 6. [04 Mar 2016]; Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06104,611,026 - 104,640,033 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01721,149,626 - 21,149,932 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.06112,776,230 - 112,805,142 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46104,728,286 - 104,732,982 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16104,731,761 - 104,736,439 (+)NCBI
Celera698,461,136 - 98,465,890 (+)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
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References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Srsf5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3664
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.