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Gene: Rpn1 (ribophorin I) Rattus norvegicus
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Symbol: Rpn1
Name: ribophorin I
RGD ID: 3594
Description: Predicted to be involved in protein N-linked glycosylation via asparagine. Localizes to rough endoplasmic reticulum. Orthologous to human RPN1 (ribophorin I); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; N-linked glycan biosynthetic pathway; INTERACTS WITH 2,4,6-trinitrotoluene; 2,6-dinitrotoluene; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDa subunit; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like; LOC100363329; RIBI; ribophorin-1; ribophorin1; RPN-I
Orthologs:
Homo sapiens (human) : RPN1 (ribophorin I)  HGNC  Alliance
Mus musculus (house mouse) : Rpn1 (ribophorin I)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rpn1 (ribophorin I)
Pan paniscus (bonobo/pygmy chimpanzee) : RPN1 (ribophorin I)
Canis lupus familiaris (dog) : RPN1 (ribophorin I)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rpn1 (ribophorin I)
Sus scrofa (pig) : RPN1 (ribophorin I)
Chlorocebus sabaeus (African green monkey) : RPN1 (ribophorin I)
Heterocephalus glaber (naked mole-rat) : Rpn1 (ribophorin I)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04119,997,232 - 120,018,687 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4119,997,268 - 120,018,679 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04185,243,182 - 185,264,593 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera4109,501,306 - 109,522,708 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rpn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3594
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.