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Gene: Rpl39 (ribosomal protein L39) Rattus norvegicus
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Symbol: Rpl39
Name: ribosomal protein L39
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in antimicrobial humoral immune response mediated by antimicrobial peptide; cytoplasmic translation; and defense response to other organism. Localizes to the cytosolic large ribosomal subunit. Orthologous to human RPL39 (ribosomal protein L39); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 60S ribosomal protein L39
Orthologs:
Homo sapiens (human) : RPL39 (ribosomal protein L39)  HGNC  Alliance
Mus musculus (house mouse) : Rpl39 (ribosomal protein L39)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rpl39 (ribosomal protein L39)
Pan paniscus (bonobo/pygmy chimpanzee) : RPL39 (ribosomal protein L39)
Canis lupus familiaris (dog) : LOC100687285 (60S ribosomal protein L39)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rpl39 (ribosomal protein L39)
Sus scrofa (pig) : RPL39 (ribosomal protein L39)
more info ...
Related Pseudogenes: Rpl39-ps  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X123,705,241 - 123,707,257 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X123,841,669 - 123,843,685 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X7,825,919 - 7,827,935 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X7,830,555 - 7,833,491 (+)NCBI
CeleraX115,554,572 - 115,556,588 (-)NCBICelera
Cytogenetic MapXq35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Rpl39
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3593
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.