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Gene: Rabggtb (Rab geranylgeranyltransferase subunit beta) Rattus norvegicus
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Symbol: Rabggtb
Name: Rab geranylgeranyltransferase subunit beta
Description: Exhibits several functions, including Rab GTPase binding activity; Rab geranylgeranyltransferase activity; and zinc ion binding activity. Involved in protein geranylgeranylation. Localizes to Rab-protein geranylgeranyltransferase complex. Orthologous to human RABGGTB (Rab geranylgeranyltransferase subunit beta); INTERACTS WITH 1,2,4-trimethylbenzene; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: geranylgeranyl transferase type II subunit beta; geranylgeranyl transferase type-2 subunit beta; GGTase-II-beta; rab geranyl-geranyltransferase subunit beta; Rab geranylgeranyl transferase componenet, subunit beta; RAB geranylgeranyl transferase, b subunit; Rab geranylgeranyltransferase, beta subunit; rab GG transferase beta; rab GGTase beta; type II protein geranyl-geranyltransferase subunit beta
Orthologs:
Homo sapiens (human) : RABGGTB (Rab geranylgeranyltransferase subunit beta)  HGNC  Alliance
Mus musculus (house mouse) : Rabggtb (Rab geranylgeranyl transferase, b subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rabggtb (Rab geranylgeranyltransferase subunit beta)
Pan paniscus (bonobo/pygmy chimpanzee) : RABGGTB (Rab geranylgeranyltransferase subunit beta)
Canis lupus familiaris (dog) : RABGGTB (Rab geranylgeranyltransferase subunit beta)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rabggtb (Rab geranylgeranyltransferase subunit beta)
Sus scrofa (pig) : RABGGTB (Rab geranylgeranyltransferase subunit beta)
Chlorocebus sabaeus (African green monkey) : RABGGTB (Rab geranylgeranyltransferase subunit beta)
Heterocephalus glaber (naked mole-rat) : Rabggtb (Rab geranylgeranyltransferase subunit beta)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02260,110,309 - 260,115,574 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2260,110,309 - 260,115,577 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02278,774,376 - 278,779,641 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42251,852,549 - 251,857,811 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12251,867,151 - 251,872,419 (-)NCBI
Celera2234,777,191 - 234,782,459 (-)NCBICelera
Cytogenetic Map2q45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Rabggtb
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3530
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.