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Gene: Prph (peripherin) Rattus norvegicus
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Symbol: Prph
Name: peripherin
Description: Predicted to have structural molecule activity. Involved in intermediate filament cytoskeleton organization. Localizes to the neuronal cell body; terminal bouton; and type III intermediate filament. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 1. Orthologous to human PRPH (peripherin); PARTICIPATES IN amyotrophic lateral sclerosis pathway; INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil; alachlor.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Perf; peripherin 1; Prph1
Orthologs:
Homo sapiens (human) : PRPH (peripherin)  HGNC  Alliance
Mus musculus (house mouse) : Prph (peripherin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prph (peripherin)
Pan paniscus (bonobo/pygmy chimpanzee) : PRPH (peripherin)
Canis lupus familiaris (dog) : PRPH (peripherin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prph (peripherin)
Sus scrofa (pig) : PRPH (peripherin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07140,742,406 - 140,746,197 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7140,742,418 - 140,746,197 (+)Ensembl
Rnor_5.0X115,247,151 - 115,251,138 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47137,836,152 - 137,839,931 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17137,912,601 - 137,916,363 (+)NCBI
Celera7126,703,099 - 126,706,878 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Prph
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3414
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.