KIF4CP (kinesin family member 4C, pseudogene) - Rat Genome Database

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Gene: KIF4CP (kinesin family member 4C, pseudogene) Homo sapiens
Analyze
Symbol: KIF4CP
Name: kinesin family member 4C, pseudogene
RGD ID: 3399986
HGNC Page HGNC:13340
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: KIF4P1
Related Functional Gene: KIF4A  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X79,323,299 - 79,324,785 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX79,323,446 - 79,325,217 (+)EnsemblGRCh38hg38GRCh38
GRCh37X78,578,796 - 78,580,282 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X78,401,095 - 78,467,322 (+)NCBINCBI36Build 36hg18NCBI36
CeleraX78,819,098 - 78,820,583 (+)NCBICelera
Cytogenetic MapXq21.1NCBI
HuRefX72,157,420 - 72,158,905 (+)NCBIHuRef
CHM1_1X78,471,965 - 78,473,450 (+)NCBICHM1_1
T2T-CHM13v2.0X77,759,984 - 77,761,469 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:10978527  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:301
Count of miRNA genes:279
Interacting mature miRNAs:297
Transcripts:ENST00000422742
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
stbA159L8SP6  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X78,532,421 - 78,532,555UniSTSGRCh37
Build 36X78,419,077 - 78,419,211RGDNCBI36
CeleraX78,772,715 - 78,772,849RGD
Cytogenetic MapXq21.1UniSTS
HuRefX72,110,257 - 72,110,391UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 1 1
Low 1 4 3 17 2 2 2 2
Below cutoff 198 260 186 34 456 17 290 119 174 29 172 220 17 115 168

Sequence


RefSeq Acc Id: ENST00000422742
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX79,323,446 - 79,325,217 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC KIF4CP COSMIC
Ensembl Genes ENSG00000225025 Ensembl
GTEx ENSG00000225025 GTEx
HGNC ID HGNC:13340 ENTREZGENE
Human Proteome Map KIF4CP Human Proteome Map
NCBI Gene 347363 ENTREZGENE
PharmGKB PA143485522 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-03-25 KIF4CP  kinesin family member 4C, pseudogene    kinesin family member 4C pseudogene  Symbol and/or name change 5135510 APPROVED