ABCC6 (ATP binding cassette subfamily C member 6) - Rat Genome Database
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Gene: ABCC6 (ATP binding cassette subfamily C member 6) Pan paniscus
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Symbol: ABCC6
Name: ATP binding cassette subfamily C member 6
RGD ID: 32733494
Description: ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN ATP transport (ortholog); cellular phosphate ion homeostasis (ortholog); drug transmembrane transport (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; ASSOCIATED WITH Animal Disease Models (ortholog); arterial calcification of infancy (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); lateral plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: multidrug resistance-associated protein 6
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Mhudiblu_PPA_v01621,443,980 - 21,477,163 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
ABCC6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Mhudiblu_PPA_v01621,443,980 - 21,477,163 (+)NCBIMhudiblu_PPA_v0panPan3
ABCC6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1616,148,928 - 16,223,522 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1616,149,565 - 16,223,522 (-)EnsemblGRCh38hg38GRCh38
GRCh381616,149,565 - 16,223,617 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371616,243,422 - 16,317,351 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361616,150,923 - 16,224,838 (-)NCBINCBI36hg18NCBI36
Build 341616,151,490 - 16,224,815NCBI
Celera1615,923,582 - 15,972,084 (-)NCBI
Cytogenetic Map16p13.11NCBI
HuRef1615,637,406 - 15,701,476 (-)NCBIHuRef
HuRef1617,226,645 - 17,228,924 (+)NCBIHuRef
CHM1_11618,669,848 - 18,691,347 (+)NCBICHM1_1
Abcc6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,625,804 - 45,679,915 (-)NCBIGRCm39mm39
GRCm39 Ensembl745,616,979 - 45,679,726 (-)Ensembl
GRCm38745,974,110 - 46,030,491 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,967,555 - 46,030,302 (-)EnsemblGRCm38mm10GRCm38
MGSCv37753,231,750 - 53,285,656 (-)NCBIGRCm37mm9NCBIm37
MGSCv36745,844,422 - 45,898,327 (-)NCBImm8
MGSCv36735,552,479 - 35,606,515 (-)NCBImm8
Celera741,445,055 - 41,502,729 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.64NCBI
Abcc6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2196,447,224 - 96,501,464 (-)NCBI
Rnor_6.0 Ensembl1101,959,540 - 102,013,243 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01101,954,786 - 102,013,252 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01103,042,723 - 103,096,453 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,448,588 - 96,524,655 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1196,526,698 - 96,602,766 (-)NCBI
Celera190,699,816 - 90,752,348 (-)NCBICelera
Cytogenetic Map1q22NCBI
Abcc6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955442865,238 - 922,221 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955442865,292 - 921,739 (-)NCBIChiLan1.0ChiLan1.0
ABCC6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl627,798,835 - 27,848,689 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1627,800,060 - 27,849,170 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Abcc6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365013,469,928 - 3,508,577 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABCC6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1328,260,935 - 28,356,706 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2328,960,801 - 29,063,405 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ABCC6
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1515,169,725 - 15,243,731 (-)NCBI
ChlSab1.1 Ensembl515,168,156 - 15,242,811 (-)Ensembl
Abcc6
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624782590,174 - 640,576 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034939998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01001823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_034939998   ⟹   XP_034795889
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01621,443,980 - 21,477,163 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034795889 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_034795889   ⟸   XM_034939998


Additional Information

Database Acc Id Source(s)
NCBI Gene ABCC6 ENTREZGENE