GID4 (GID complex subunit 4 homolog) - Rat Genome Database

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Gene: GID4 (GID complex subunit 4 homolog) Pan paniscus
Analyze
Symbol: GID4
Name: GID complex subunit 4 homolog
RGD ID: 32727819
Description: ASSOCIATED WITH autistic disorder (ortholog); Birt-Hogg-Dube syndrome (ortholog); common variable immunodeficiency 2 (ortholog); FOUND IN ubiquitin ligase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: glucose-induced degradation protein 4 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21952,555,739 - 52,585,045 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11757,267,982 - 57,297,284 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01733,226,374 - 33,256,146 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
GID4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21952,555,739 - 52,585,045 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11757,267,982 - 57,297,284 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01733,226,374 - 33,256,146 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
GID4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381718,039,408 - 18,068,405 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1718,039,408 - 18,068,405 (+)EnsemblGRCh38hg38GRCh38
GRCh371717,942,722 - 17,971,719 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361717,883,336 - 17,912,443 (+)NCBINCBI36Build 36hg18NCBI36
Build 341717,883,335 - 17,912,443NCBI
Celera1718,883,766 - 18,912,866 (+)NCBICelera
Cytogenetic Map17p11.2NCBI
HuRef1717,696,381 - 17,725,271 (+)NCBIHuRef
CHM1_11717,951,442 - 17,980,554 (+)NCBICHM1_1
T2T-CHM13v2.01717,986,211 - 18,015,201 (+)NCBIT2T-CHM13v2.0
Gid4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391160,307,971 - 60,336,103 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1160,307,971 - 60,341,753 (+)EnsemblGRCm39 Ensembl
GRCm381160,417,145 - 60,445,277 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1160,417,145 - 60,450,927 (+)EnsemblGRCm38mm10GRCm38
MGSCv371160,230,647 - 60,258,779 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361160,233,498 - 60,261,472 (+)NCBIMGSCv36mm8
Celera1166,422,835 - 66,451,172 (-)NCBICelera
Cytogenetic Map11B2NCBI
cM Map1137.81NCBI
Gid4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81045,721,055 - 45,747,132 (+)NCBIGRCr8
mRatBN7.21045,221,556 - 45,247,627 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1045,221,579 - 45,245,169 (+)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1045,245,754 - 45,247,621 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1049,921,761 - 49,947,809 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01049,412,139 - 49,438,197 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01044,915,742 - 44,941,799 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01046,784,124 - 46,810,517 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1046,783,979 - 46,810,524 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01046,539,451 - 46,565,841 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41046,684,548 - 46,685,415 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1044,478,592 - 44,504,744 (+)NCBICelera
Cytogenetic Map10q22NCBI
Gid4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547811,226,449 - 11,243,935 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495547811,223,083 - 11,242,986 (-)NCBIChiLan1.0ChiLan1.0
GID4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1541,455,823 - 41,477,478 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl541,458,936 - 41,474,358 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha541,595,313 - 41,619,753 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0541,562,631 - 41,587,075 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl541,565,026 - 41,587,075 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1541,530,387 - 41,554,816 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0541,477,802 - 41,502,240 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0541,669,675 - 41,694,110 (-)NCBIUU_Cfam_GSD_1.0
Gid4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560261,231,466 - 61,253,168 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367411,620,359 - 1,635,799 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367411,618,522 - 1,635,776 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GID4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,601,003 - 60,617,454 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,600,993 - 60,617,601 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GID4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11617,079,643 - 17,108,651 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1617,079,800 - 17,105,526 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660593,799,976 - 3,828,905 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gid4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248493,386,101 - 3,408,924 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248493,385,312 - 3,408,842 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_034942300   ⟹   XP_034798191
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21952,555,739 - 52,585,045 (+)NCBI
NHGRI_mPanPan11757,267,982 - 57,297,284 (+)NCBI
Mhudiblu_PPA_v01733,226,374 - 33,256,146 (-)NCBI
RefSeq Acc Id: XM_034942301   ⟹   XP_034798192
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21952,555,801 - 52,585,045 (+)NCBI
NHGRI_mPanPan11757,268,037 - 57,297,284 (+)NCBI
Mhudiblu_PPA_v01733,226,374 - 33,256,140 (-)NCBI
RefSeq Acc Id: XM_063599190   ⟹   XP_063455260
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21952,555,799 - 52,573,504 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034798191 (Get FASTA)   NCBI Sequence Viewer  
  XP_034798192 (Get FASTA)   NCBI Sequence Viewer  
  XP_063455260 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_034798191   ⟸   XM_034942300
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034798192   ⟸   XM_034942301
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063455260   ⟸   XM_063599190
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
NCBI Gene GID4 ENTREZGENE