Mxi1 (MAX interactor 1, dimerization protein) - Rat Genome Database

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Gene: Mxi1 (MAX interactor 1, dimerization protein) Rattus norvegicus
Analyze
Symbol: Mxi1
Name: MAX interactor 1, dimerization protein
RGD ID: 3128
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to contribute to DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in regulation of DNA-templated transcription. Predicted to be located in cytosol; nucleolus; and nucleoplasm. Predicted to be part of RNA polymerase II transcription regulator complex. Used to study breast adenocarcinoma and esophageal cancer. Human ortholog(s) of this gene implicated in neurofibrosarcoma and prostate cancer. Orthologous to human MXI1 (MAX interactor 1, dimerization protein); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2-ethoxyethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC100360467; LOC100360898; Max interacting protein 1; MAX interactor 1; Max interactor 1-like; MAX-interacting protein 1; MXI-WR
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81262,329,274 - 262,389,037 (+)NCBIGRCr8
mRatBN7.21252,323,915 - 252,383,682 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1252,323,303 - 252,383,681 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1260,532,436 - 260,572,821 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01267,238,502 - 267,278,887 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01259,894,073 - 259,934,513 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01274,030,748 - 274,090,071 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1274,030,978 - 274,090,071 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01281,443,967 - 281,503,729 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41259,219,584 - 259,259,979 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11259,720,129 - 259,760,524 (+)NCBI
Celera1248,065,618 - 248,106,019 (+)NCBICelera
RH 3.4 Map11664.7RGD
Cytogenetic Map1q55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dimethylhydrazine  (ISO)
14-Deoxy-11,12-didehydroandrographolide  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-deoxy-D-glucose  (ISO)
2-ethoxyethanol  (EXP)
2-methoxyethanol  (EXP)
3H-1,2-dithiole-3-thione  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
acrolein  (ISO)
acrylamide  (EXP)
adefovir pivoxil  (ISO)
aflatoxin B1  (EXP)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
ammonium chloride  (EXP)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
bleomycin A2  (ISO)
cadmium dichloride  (ISO)
CGP 52608  (ISO)
chloroacetaldehyde  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
chromium(6+)  (ISO)
cidofovir anhydrous  (ISO)
cisplatin  (ISO)
clodronic acid  (ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
CU-O LINKAGE  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
DDT  (EXP)
dexamethasone  (ISO)
dibutyl phthalate  (EXP)
dioxygen  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
etoposide  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
fulvestrant  (ISO)
gemcitabine  (ISO)
gentamycin  (EXP)
geraniol  (ISO)
glafenine  (EXP)
hydroxyurea  (ISO)
ifosfamide  (ISO)
L-methionine  (ISO)
methimazole  (EXP)
methylseleninic acid  (ISO)
mitoxantrone  (ISO)
N,N-diethyl-m-toluamide  (EXP)
N-nitrosodiethylamine  (EXP)
nickel dichloride  (ISO)
niclosamide  (ISO)
nitroglycerin  (EXP)
ozone  (ISO)
paracetamol  (EXP)
permethrin  (EXP)
phenethyl caffeate  (EXP)
quercetin  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tamoxifen  (ISO)
thioacetamide  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

References

References - curated
# Reference Title Reference Citation
1. Mutation of the MXI1 gene in prostate cancer. Eagle LR, etal., Nat Genet. 1995 Mar;9(3):249-55.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
5. Mxi1 mutations in human neurofibrosarcomas. Li XJ, etal., Jpn J Cancer Res. 1999 Jul;90(7):740-6.
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
8. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
9. GOA pipeline RGD automated data pipeline
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. The influence of H-2 gene products on cell-mediated and humoral immune responses. von Boehmer H, etal., Cold Spring Harb Symp Quant Biol 1977;41 Pt 2:539-45.
13. Mxi1 is a potential cellular target of carcinogens and frequently mutated in experimental rat tumors and tumor cell lines. Wang DY, etal., Pathol Int 2000 May;50(5):373-83.
14. Expression and subcellular localization of the Myc superfamily proteins: c-Myc, Max, Mad1 and Mxi1 in the epiphyseal plate cartilage chondrocytes of growing rats. Wang Y, etal., Cell Mol Biol (Noisy-le-grand). 1997 Mar;43(2):175-88.
15. Dynamic in vivo interactions among Myc network members. Yin X, etal., Oncogene 2001 Aug 2;20(34):4650-64.
Additional References at PubMed
PMID:8425219   PMID:11875718   PMID:12477932   PMID:15467743   PMID:27869233  


Genomics

Comparative Map Data
Mxi1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81262,329,274 - 262,389,037 (+)NCBIGRCr8
mRatBN7.21252,323,915 - 252,383,682 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1252,323,303 - 252,383,681 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1260,532,436 - 260,572,821 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01267,238,502 - 267,278,887 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01259,894,073 - 259,934,513 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01274,030,748 - 274,090,071 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1274,030,978 - 274,090,071 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01281,443,967 - 281,503,729 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41259,219,584 - 259,259,979 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11259,720,129 - 259,760,524 (+)NCBI
Celera1248,065,618 - 248,106,019 (+)NCBICelera
RH 3.4 Map11664.7RGD
Cytogenetic Map1q55NCBI
MXI1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810110,207,605 - 110,287,365 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10110,207,605 - 110,287,365 (+)EnsemblGRCh38hg38GRCh38
GRCh3710111,967,363 - 112,047,123 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610111,957,353 - 112,037,113 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410111,975,751 - 112,037,113NCBI
Celera10105,699,035 - 105,778,792 (+)NCBICelera
Cytogenetic Map10q25.2NCBI
HuRef10105,597,875 - 105,677,336 (+)NCBIHuRef
CHM1_110112,249,113 - 112,328,883 (+)NCBICHM1_1
T2T-CHM13v2.010111,091,474 - 111,171,229 (+)NCBIT2T-CHM13v2.0
Mxi1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391953,298,509 - 53,361,724 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1953,298,949 - 53,364,241 (+)EnsemblGRCm39 Ensembl
GRCm381953,310,128 - 53,373,293 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1953,310,518 - 53,375,810 (+)EnsemblGRCm38mm10GRCm38
MGSCv371953,384,996 - 53,450,300 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361953,363,833 - 53,426,600 (+)NCBIMGSCv36mm8
Celera1955,492,539 - 55,557,842 (+)NCBICelera
Cytogenetic Map19D2NCBI
cM Map1947.53NCBI
Mxi1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554851,088,175 - 1,156,925 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554851,088,175 - 1,156,521 (-)NCBIChiLan1.0ChiLan1.0
MXI1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28122,085,056 - 122,165,519 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110122,090,519 - 122,170,854 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010106,799,511 - 106,878,697 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110110,252,184 - 110,328,782 (+)NCBIpanpan1.1PanPan1.1panPan2
MXI1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12821,584,856 - 21,655,233 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2821,584,638 - 21,652,920 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2821,727,467 - 21,808,682 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02822,099,102 - 22,180,921 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2822,099,304 - 22,182,100 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12821,659,914 - 21,741,144 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02821,663,825 - 21,745,111 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02821,799,743 - 21,880,999 (+)NCBIUU_Cfam_GSD_1.0
Mxi1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721324,384,066 - 24,459,537 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364861,101,552 - 1,177,220 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364861,103,908 - 1,173,982 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MXI1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14120,643,830 - 120,724,099 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114120,643,691 - 120,722,632 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214131,570,946 - 131,610,162 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MXI1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19103,131,534 - 103,211,609 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl9103,131,420 - 103,209,231 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604864,334,329 - 64,414,023 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mxi1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473735,955,726 - 36,034,695 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473735,956,443 - 36,034,678 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mxi1
210 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:184
Count of miRNA genes:114
Interacting mature miRNAs:148
Transcripts:ENSRNOT00000042822
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1176426412257976495Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1177227632256448636Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1195804352257091168Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459259647894Rat
1358890Bp259Blood pressure QTL 2593.06arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1210702053260522016Rat
734768Niddm59Non-insulin dependent diabetes mellitus QTL 59body mass (VT:0001259)body weight (CMO:0000012)1213843987258843987Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1214647894259647894Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1214647894259647894Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1216255568260522016Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1216255568260522016Rat
1598821Rf55Renal function QTL 556.3renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1218748008257976495Rat
724533Rf51Renal function QTL 515.30.0002kidney plasma flow trait (VT:0005524)renal plasma flow (CMO:0001914)1218753816256448513Rat
731175Uae20Urinary albumin excretion QTL 203.50.0018urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1221264111259647894Rat
10053715Scort24Serum corticosterone level QTL 242.130.0088blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1221414816260522016Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1222363780260522016Rat
1600392Bw123Body weight QTL 1230.001body mass (VT:0001259)body weight (CMO:0000012)1223201027260522016Rat
734767Niddm57Non-insulin dependent diabetes mellitus QTL 57body mass (VT:0001259)body weight (CMO:0000012)1224054293260122809Rat
631843Bw116Body weight QTL 1164.10.016abdominal adipose amount (VT:1000220)abdominal fat pad weight (CMO:0000088)1224054293260122809Rat
734769Niddm58Non-insulin dependent diabetes mellitus QTL 58body mass (VT:0001259)body weight (CMO:0000012)1224569538260122809Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1225126575260522016Rat
1300108Rf8Renal function QTL 83.75renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1228581588259647894Rat
1581544Rf52Renal function QTL 520.05urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)1232156370259647894Rat
631669Iddm9Insulin dependent diabetes mellitus QTL 92.80.039blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1233190394258625266Rat
631536Lnnr2Liver neoplastic nodule remodeling QTL 22.90.0005liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)1233948574260522016Rat
631690Scl5Serum cholesterol level QTL 52.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1236125214260522016Rat
631836Stl31Serum triglyceride level QTL 314.640.00000487blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1237147813260522016Rat
631837Niddm35Non-insulin dependent diabetes mellitus QTL 350.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1238699859259647894Rat
1598839Rf56Renal function QTL 56renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1245907761257976495Rat

Markers in Region
RH127398  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21252,383,464 - 252,383,644 (+)MAPPERmRatBN7.2
Rnor_6.01274,089,854 - 274,090,033NCBIRnor6.0
Rnor_5.01281,503,512 - 281,503,691UniSTSRnor5.0
Celera1248,105,802 - 248,105,981UniSTS
RH 3.4 Map11665.3UniSTS
Cytogenetic Map1q55UniSTS
BG376247  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21252,382,445 - 252,382,555 (+)MAPPERmRatBN7.2
Rnor_6.01274,088,835 - 274,088,944NCBIRnor6.0
Rnor_5.01281,502,493 - 281,502,602UniSTSRnor5.0
Celera1248,104,783 - 248,104,892UniSTS
RH 3.4 Map11670.6UniSTS
Cytogenetic Map1q55UniSTS
RH94430  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01281,502,217 - 281,502,380NCBIRnor5.0
RGSC_v3.41259,220,933 - 259,221,095UniSTSRGSC3.4
RH 3.4 Map11664.7UniSTS
Cytogenetic Map1q55UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 54 38 19 38 8 11 74 35 41 11 8
Low 3 3 3
Below cutoff

Sequence


RefSeq Acc Id: ENSRNOT00000042822   ⟹   ENSRNOP00000040770
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1252,343,285 - 252,383,681 (+)Ensembl
Rnor_6.0 Ensembl1274,049,676 - 274,090,071 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000076387   ⟹   ENSRNOP00000068001
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1252,323,303 - 252,383,681 (+)Ensembl
Rnor_6.0 Ensembl1274,030,978 - 274,090,066 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000076779   ⟹   ENSRNOP00000067990
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1252,343,252 - 252,383,681 (+)Ensembl
Rnor_6.0 Ensembl1274,049,533 - 274,090,070 (+)Ensembl
RefSeq Acc Id: NM_013160   ⟹   NP_037292
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81262,348,642 - 262,389,037 (+)NCBI
mRatBN7.21252,343,285 - 252,383,682 (+)NCBI
Rnor_6.01274,049,676 - 274,090,071 (+)NCBI
Rnor_5.01281,443,967 - 281,503,729 (+)NCBI
RGSC_v3.41259,219,584 - 259,259,979 (-)RGD
Celera1248,065,618 - 248,106,019 (+)RGD
Sequence:
RefSeq Acc Id: XM_006231604   ⟹   XP_006231666
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81262,329,274 - 262,389,037 (+)NCBI
mRatBN7.21252,323,915 - 252,383,682 (+)NCBI
Rnor_6.01274,030,748 - 274,090,071 (+)NCBI
Rnor_5.01281,443,967 - 281,503,729 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006231606   ⟹   XP_006231668
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81262,349,421 - 262,389,037 (+)NCBI
mRatBN7.21252,343,958 - 252,383,682 (+)NCBI
Rnor_6.01274,050,349 - 274,090,071 (+)NCBI
Rnor_5.01281,443,967 - 281,503,729 (+)NCBI
Sequence:
RefSeq Acc Id: NP_037292   ⟸   NM_013160
- UniProtKB: O09015 (UniProtKB/Swiss-Prot),   Q642D1 (UniProtKB/TrEMBL),   K3W4V2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006231666   ⟸   XM_006231604
- Peptide Label: isoform X1
- UniProtKB: A0A096MJ60 (UniProtKB/TrEMBL),   A6JHU5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006231668   ⟸   XM_006231606
- Peptide Label: isoform X2
- UniProtKB: O09015 (UniProtKB/Swiss-Prot),   A6JHU9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000040770   ⟸   ENSRNOT00000042822
RefSeq Acc Id: ENSRNOP00000068001   ⟸   ENSRNOT00000076387
RefSeq Acc Id: ENSRNOP00000067990   ⟸   ENSRNOT00000076779
Protein Domains
bHLH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O09015-F1-model_v2 AlphaFold O09015 1-228 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13690991
Promoter ID:EPDNEW_R1514
Type:initiation region
Name:Mxi1_2
Description:MAX interactor 1, dimerization protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R1515  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01274,030,990 - 274,031,050EPDNEW
RGD ID:13690994
Promoter ID:EPDNEW_R1515
Type:initiation region
Name:Mxi1_1
Description:MAX interactor 1, dimerization protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R1514  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01274,049,545 - 274,049,605EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:3128 AgrOrtholog
BioCyc Gene G2FUF-55399 BioCyc
Ensembl Genes ENSRNOG00000034078 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000042822 ENTREZGENE
  ENSRNOT00000042822.5 UniProtKB/TrEMBL
  ENSRNOT00000076387 ENTREZGENE
  ENSRNOT00000076387.3 UniProtKB/TrEMBL
  ENSRNOT00000076779.3 UniProtKB/TrEMBL
Gene3D-CATH 4.10.280.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7133853 IMAGE-MGC_LOAD
InterPro bHLH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HLH_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:25701 UniProtKB/TrEMBL
MGC_CLONE MGC:93544 IMAGE-MGC_LOAD
NCBI Gene 25701 ENTREZGENE
PANTHER MAX DIMERIZATION, MAD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MAX-INTERACTING PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mxi1 PhenoGen
PROSITE BHLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000034078 RatGTEx
SMART HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47459 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A096MJ49_RAT UniProtKB/TrEMBL
  A0A096MJ60 ENTREZGENE, UniProtKB/TrEMBL
  A6JHU5 ENTREZGENE, UniProtKB/TrEMBL
  A6JHU7_RAT UniProtKB/TrEMBL
  A6JHU8_RAT UniProtKB/TrEMBL
  A6JHU9 ENTREZGENE, UniProtKB/TrEMBL
  K3W4V2 ENTREZGENE, UniProtKB/TrEMBL
  MXI1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  P70542_RAT UniProtKB/TrEMBL
  Q642D1 ENTREZGENE, UniProtKB/TrEMBL
  Q6RKA6_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-29 Mxi1  MAX interactor 1, dimerization protein  LOC100360467  Max interactor 1-like  Data merged from RGD:2322089 737654 PROVISIONAL
2013-04-12 Mxi1  MAX interactor 1, dimerization protein  LOC100360898  Max interactor 1-like  Data merged from RGD:2321260 737654 PROVISIONAL
2012-11-21 Mxi1  MAX interactor 1, dimerization protein  Mxi1  MAX interactor 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-06 LOC100360467  Max interactor 1-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2010-05-05 LOC100360898  Max interactor 1-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-09-09 Mxi1  MAX interactor 1  Mxi1  Max interacting protein 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Mxi1  max interacting protein 1      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_process regulates Myc oncoprotein activity thus playing an important role in proliferation, differentiation, and apoptosis 70302