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Gene: SPATA48 (spermatogenesis associated 48) Homo sapiens
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Symbol: SPATA48
Name: spermatogenesis associated 48
Description: ASSOCIATED WITH pleomorphic xanthoastrocytoma; INTERACTS WITH arsane; arsenic atom; valproic acid
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: C7orf72; chromosome 7 open reading frame 72; hypothetical protein LOC100130988; spermatogenesis-associated protein 48; uncharacterized protein C7orf72
Orthologs:
Mus musculus (house mouse) : Spata48 (spermatogenesis associated 48)  MGI  Alliance
Rattus norvegicus (Norway rat) : Spata48 (spermatogenesis associated 48)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spata48 (spermatogenesis associated 48)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATA48 (spermatogenesis associated 48)
Canis lupus familiaris (dog) : SPATA48 (spermatogenesis associated 48)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spata48 (spermatogenesis associated 48)
Sus scrofa (pig) : SPATA48 (spermatogenesis associated 48)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl750,096,036 - 50,159,830 (+)Ensembl
GRCh38750,095,861 - 50,159,256 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37750,135,682 - 50,198,852 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36750,106,348 - 50,169,398 (+)NCBINCBI36hg18NCBI36
Celera750,229,773 - 50,293,484 (+)NCBI
Cytogenetic Map7p12.2NCBI
HuRef750,016,509 - 50,079,746 (+)NCBIHuRef
CHM1_1750,137,668 - 50,201,160 (+)NCBICHM1_1
CRA_TCAGchr7v2750,172,871 - 50,236,064 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SPATA48
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2902413
Created: 2010-07-04
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.