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Gene: Siglecl1 (SIGLEC family like 1) Rattus norvegicus
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Symbol: Siglecl1
Name: SIGLEC family like 1
Description: Predicted to localize to integral component of membrane. Orthologous to human SIGLECL1 (SIGLEC family like 1); INTERACTS WITH benzo[a]pyrene (ortholog); serpentine asbestos (ortholog); silicon dioxide (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100362567; sialic acid binding Ig-like lectin 5-like; SIGLEC family-like protein 1
Orthologs:
Homo sapiens (human) : SIGLECL1 (SIGLEC family like 1)  HGNC  Alliance
Mus musculus (house mouse) : Siglecl1 (Siglec family like 1)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Siglecl1 (SIGLEC family like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SIGLECL1 (SIGLEC family like 1)
Canis lupus familiaris (dog) : SIGLECL1 (SIGLEC family like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Siglecl1 (SIGLEC family like 1)
Sus scrofa (pig) : LOC100512905 (igLON family member 5)
Chlorocebus sabaeus (African green monkey) : SIGLECL1 (SIGLEC family like 1)
Heterocephalus glaber (naked mole-rat) : Siglecl1 (SIGLEC family like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0198,414,197 - 98,421,975 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl198,414,226 - 98,421,973 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0199,491,038 - 99,498,849 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4193,884,846 - 93,902,421 (-)NCBIRGSC3.4rn4RGSC3.4
Celera188,193,130 - 88,200,908 (-)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Siglecl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2324488
Created: 2010-05-06
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.