Mpv17l (MPV17 mitochondrial inner membrane protein like) - Rat Genome Database

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Gene: Mpv17l (MPV17 mitochondrial inner membrane protein like) Rattus norvegicus
Analyze
Symbol: Mpv17l
Name: MPV17 mitochondrial inner membrane protein like
RGD ID: 2324483
Description: Predicted to be involved in negative regulation of hydrogen peroxide biosynthetic process; negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway; and reactive oxygen species metabolic process. Predicted to be located in peroxisome. Predicted to be active in mitochondrion. Orthologous to human MPV17L (MPV17 mitochondrial inner membrane protein like); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC100362572; LOC103693261; MPV17 mitochondrial membrane protein-like; Mpv17 transgene, kidney disease mutant-like (predicted)-like; uncharacterized LOC103693261
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2101,988,451 - 2,025,300 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl101,988,136 - 2,007,649 (-)Ensembl
Rnor_6.0103,321,488 - 3,359,219 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl103,321,476 - 3,357,470 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0102,198,456 - 2,240,921 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4101,655,565 - 1,672,677 (+)NCBIRGSC3.4rn4RGSC3.4
Celera101,020,550 - 1,057,289 (-)NCBICelera
Cytogenetic Map10q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16631601   PMID:18614015   PMID:20178365   PMID:22306510  


Genomics

Comparative Map Data
Mpv17l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2101,988,451 - 2,025,300 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl101,988,136 - 2,007,649 (-)Ensembl
Rnor_6.0103,321,488 - 3,359,219 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl103,321,476 - 3,357,470 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0102,198,456 - 2,240,921 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4101,655,565 - 1,672,677 (+)NCBIRGSC3.4rn4RGSC3.4
Celera101,020,550 - 1,057,289 (-)NCBICelera
Cytogenetic Map10q11NCBI
MPV17L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381615,395,754 - 15,413,271 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1615,395,754 - 15,413,271 (+)EnsemblGRCh38hg38GRCh38
GRCh371615,489,611 - 15,507,128 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361615,397,137 - 15,411,044 (+)NCBINCBI36hg18NCBI36
Celera1615,170,072 - 15,184,012 (+)NCBI
Cytogenetic Map16p13.11NCBI
HuRef1614,882,901 - 14,896,979 (+)NCBIHuRef
CHM1_11615,573,943 - 15,587,891 (+)NCBICHM1_1
T2T-CHM13v2.01615,400,550 - 15,418,071 (+)NCBI
Mpv17l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391613,721,025 - 13,767,483 (+)NCBIGRCm39mm39
GRCm39 Ensembl1613,721,025 - 13,767,483 (+)Ensembl
GRCm381613,903,161 - 13,949,619 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1613,903,161 - 13,949,619 (+)EnsemblGRCm38mm10GRCm38
MGSCv371613,940,788 - 13,949,450 (+)NCBIGRCm37mm9NCBIm37
MGSCv361613,854,273 - 13,862,935 (+)NCBImm8
Celera1614,545,960 - 14,554,599 (+)NCBICelera
Cytogenetic Map16A1NCBI
Mpv17l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955442269,382 - 313,056 (+)NCBIChiLan1.0ChiLan1.0
MPV17L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11615,703,834 - 15,712,232 (+)NCBIpanpan1.1PanPan1.1panPan2
MPV17L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1628,385,199 - 28,393,560 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha629,746,839 - 29,757,055 (-)NCBI
ROS_Cfam_1.0628,546,545 - 28,556,760 (-)NCBI
UMICH_Zoey_3.1628,349,672 - 28,359,880 (-)NCBI
UNSW_CanFamBas_1.0628,242,054 - 28,250,022 (-)NCBI
UU_Cfam_GSD_1.0628,647,729 - 28,655,709 (-)NCBI
Mpv17l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344114,919,182 - 114,934,718 (+)NCBI
SpeTri2.0NW_0049365013,017,071 - 3,028,294 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MPV17L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl37,427,395 - 7,442,033 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.137,423,083 - 7,441,583 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MPV17L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1514,397,299 - 14,407,694 (+)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606815,656,812 - 15,668,534 (-)NCBIVero_WHO_p1.0
Mpv17l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248248,707,104 - 8,723,649 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
BI281552  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,235,937 - 25,236,157 (+)MAPPERmRatBN7.2
Rnor_6.0626,599,962 - 26,600,181NCBIRnor6.0
Rnor_5.0636,416,342 - 36,416,561UniSTSRnor5.0
RGSC_v3.4625,214,606 - 25,214,825UniSTSRGSC3.4
Celera624,727,062 - 24,727,281UniSTS
RH 3.4 Map6119.08UniSTS
BE110423  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,224,001 - 25,224,207 (+)MAPPERmRatBN7.2
Rnor_6.0626,588,051 - 26,588,256NCBIRnor6.0
Rnor_5.0636,404,755 - 36,404,960UniSTSRnor5.0
RGSC_v3.4625,201,311 - 25,201,516UniSTSRGSC3.4
Celera624,715,084 - 24,715,289UniSTS
RH 3.4 Map693.0UniSTS
MARC_16687-16688:1017861800:1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,231,637 - 25,232,402 (+)MAPPERmRatBN7.2
Rnor_6.0626,595,687 - 26,596,451NCBIRnor6.0
Rnor_5.0636,412,391 - 36,413,155UniSTSRnor5.0
RGSC_v3.4625,208,947 - 25,209,711UniSTSRGSC3.4
Celera624,722,720 - 24,723,484UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:26
Count of miRNA genes:25
Interacting mature miRNAs:26
Transcripts:ENSRNOT00000004384
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 4 4 4 24 14
Low 2 24 45 37 37 4 4 50 21 41 5 4
Below cutoff 1 17 8 18 4 6 5 4

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001402078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001402079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003752286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006220558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005490607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005490608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACYVU010000217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000004384   ⟹   ENSRNOP00000004384
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl101,989,605 - 2,007,626 (-)Ensembl
Rnor_6.0 Ensembl103,338,808 - 3,357,278 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000086929
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl103,353,519 - 3,357,402 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000090166   ⟹   ENSRNOP00000074254
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl101,989,605 - 2,007,649 (-)Ensembl
Rnor_6.0 Ensembl103,321,476 - 3,357,470 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000093444   ⟹   ENSRNOP00000076186
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl101,989,605 - 2,007,649 (-)Ensembl
Rnor_6.0 Ensembl103,338,880 - 3,353,769 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000112675   ⟹   ENSRNOP00000078889
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl101,988,136 - 2,007,649 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115587   ⟹   ENSRNOP00000094538
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl101,988,136 - 2,007,601 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000117447   ⟹   ENSRNOP00000095618
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl101,988,136 - 2,007,601 (-)Ensembl
RefSeq Acc Id: XM_008767466   ⟹   XP_008765688
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2101,988,451 - 2,007,639 (-)NCBI
Rnor_6.0103,338,755 - 3,359,219 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008767467   ⟹   XP_008765689
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2101,988,451 - 2,007,640 (-)NCBI
Rnor_6.0103,338,751 - 3,359,219 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008767468   ⟹   XP_008765690
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2101,988,451 - 2,025,300 (-)NCBI
Rnor_6.0103,321,488 - 3,359,219 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008767469   ⟹   XP_008765691
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2101,988,451 - 2,007,350 (-)NCBI
Rnor_6.0103,340,257 - 3,359,219 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008767470   ⟹   XP_008765692
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2101,988,451 - 2,007,222 (-)NCBI
Rnor_6.0103,339,167 - 3,359,219 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039087605   ⟹   XP_038943533
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2102,003,843 - 2,007,642 (-)NCBI
RefSeq Acc Id: XR_005490607
RefSeq Status:
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2101,988,451 - 2,007,641 (-)NCBI
RefSeq Acc Id: XR_005490608
RefSeq Status:
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2101,990,927 - 2,007,641 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_008765690   ⟸   XM_008767468
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_008765689   ⟸   XM_008767467
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_008765688   ⟸   XM_008767466
- Peptide Label: isoform X1
- UniProtKB: D4A908 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008765692   ⟸   XM_008767470
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_008765691   ⟸   XM_008767469
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: ENSRNOP00000074254   ⟸   ENSRNOT00000090166
RefSeq Acc Id: ENSRNOP00000004384   ⟸   ENSRNOT00000004384
RefSeq Acc Id: ENSRNOP00000076186   ⟸   ENSRNOT00000093444
RefSeq Acc Id: XP_038943533   ⟸   XM_039087605
- Peptide Label: isoform X3
RefSeq Acc Id: ENSRNOP00000078889   ⟸   ENSRNOT00000112675
RefSeq Acc Id: ENSRNOP00000094538   ⟸   ENSRNOT00000115587
RefSeq Acc Id: ENSRNOP00000095618   ⟸   ENSRNOT00000117447

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A908-F1-model_v2 AlphaFold D4A908 1-194 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696935
Promoter ID:EPDNEW_R7455
Type:initiation region
Name:Mpv17l_1
Description:MPV17 mitochondrial inner membrane protein like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0103,338,818 - 3,338,878EPDNEW

Strain Variation

Strain Sequence Variants (MRatBN7.2)
ACI/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
ACI/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN-Lx/CubMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/SsN (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BUF/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH2/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH3/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
DA/OlaHsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/DuCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FHH/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE16/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE18/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
GK/FarMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB10/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB2/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB20/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB31/IpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB4/IpcvMcwi (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LE/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEW/Crl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF10A/StmMcwi (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF11/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1A/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1C/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF2B/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF3/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF4/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LH/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LL/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LN/MavRrrcAek (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/NRrrcMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MR/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MWF/Hsd (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
PVG/Seac (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHR/OlalpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHRSP/A3NCrl (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SR/JrHsd (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SS/JrHsdMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WAG/RijCrl (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WN/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2324483 AgrOrtholog
BioCyc Gene G2FUF-26214 BioCyc
Ensembl Genes ENSRNOG00000003285 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000004384.5 UniProtKB/TrEMBL
  ENSRNOP00000074254 ENTREZGENE
  ENSRNOP00000074254.3 UniProtKB/TrEMBL
  ENSRNOP00000076186.2 UniProtKB/TrEMBL
  ENSRNOP00000078889.1 UniProtKB/TrEMBL
  ENSRNOP00000094538.1 UniProtKB/TrEMBL
  ENSRNOP00000095618.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000004384.8 UniProtKB/TrEMBL
  ENSRNOT00000090166 ENTREZGENE
  ENSRNOT00000090166.3 UniProtKB/TrEMBL
  ENSRNOT00000093444.2 UniProtKB/TrEMBL
  ENSRNOT00000112675 ENTREZGENE
  ENSRNOT00000112675.1 UniProtKB/TrEMBL
  ENSRNOT00000115587.1 UniProtKB/TrEMBL
  ENSRNOT00000117447.1 UniProtKB/TrEMBL
InterPro Mpv17_PMP22 UniProtKB/TrEMBL
KEGG Report rno:100362572 UniProtKB/TrEMBL
NCBI Gene 100362572 ENTREZGENE
PANTHER Mpv17_PMP22 UniProtKB/TrEMBL
Pfam Mpv17_PMP22 UniProtKB/TrEMBL
PhenoGen Mpv17l PhenoGen
UniProt A0A0G2K7L3_RAT UniProtKB/TrEMBL
  A0A1W2Q697_RAT UniProtKB/TrEMBL
  A0A8I6GL80_RAT UniProtKB/TrEMBL
  D4A908 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Mpv17l  MPV17 mitochondrial inner membrane protein like  LOC103693261  uncharacterized LOC103693261  Data Merged 737654 PROVISIONAL
2016-03-22 Mpv17l  MPV17 mitochondrial inner membrane protein like  Mpv17l  MPV17 mitochondrial membrane protein-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-08-25 LOC103693261  uncharacterized LOC103693261      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-08-29 Mpv17l  MPV17 mitochondrial membrane protein-like  LOC100362572  Mpv17 transgene, kidney disease mutant-like (predicted)-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-06 LOC100362572  Mpv17 transgene, kidney disease mutant-like (predicted)-like      Symbol and Name status set to provisional 70820 PROVISIONAL