Gene: Rps21-ps1 (ribosomal protein S21, pseudogene 1) Rattus norvegicus
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Symbol: Rps21-ps1
Name: ribosomal protein S21, pseudogene 1
Description: Predicted to have protein N-terminus binding activity. Predicted to be involved in cytoplasmic translation; endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); and endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to the cytosolic small ribosomal subunit; polysomal ribosome; and synapse. Orthologous to human RPS21 (ribosomal protein S21); INTERACTS WITH 1-naphthyl isothiocyanate; ammonium chloride; bisphenol A.
Type: pseudo
RefSeq Status: INFERRED
Also known as: 40S ribosomal protein S21-like; LOC100363012
Orthologs:
Homo sapiens (human) : RPS21 (ribosomal protein S21)  HGNC  Alliance
Mus musculus (house mouse) : Rps21 (ribosomal protein S21)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rps21 (ribosomal protein S21)
Pan paniscus (bonobo/pygmy chimpanzee) : RPS21 (ribosomal protein S21)
Canis lupus familiaris (dog) : RPS21 (ribosomal protein S21)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rps21 (ribosomal protein S21)
Sus scrofa (pig) : RPS21 (ribosomal protein S21)
more info ...
Related Functional Gene: Rps21  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05159,606,647 - 159,606,990 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05163,318,974 - 163,319,321 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45159,941,522 - 159,941,773 (+)NCBIRGSC3.4rn4RGSC3.4
Celera5151,751,756 - 151,752,099 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rps21-ps1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2323583
Created: 2010-05-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.