LOC100363782 (RAB1B, member RAS oncogene family-like) - Rat Genome Database

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Gene: LOC100363782 (RAB1B, member RAS oncogene family-like) Rattus norvegicus
Analyze
No known orthologs.
Symbol: LOC100363782
Name: RAB1B, member RAS oncogene family-like
RGD ID: 2322370
Description: Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; positive regulation of glycoprotein metabolic process; and regulation of autophagosome assembly. Predicted to be located in Golgi apparatus and phagophore assembly site membrane.
Type: protein-coding
RefSeq Status: WITHDRAWN
Also known as: ras-related protein Rab-1B
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl1220,480,834 - 220,491,469 (-)EnsemblRnor6.0rn6Rnor6.0
CeleraX51,391,548 - 51,392,577 (+)NCBICelera
Cytogenetic MapX NCBI


References

References - curated
1. RGD automated import pipeline for gene-chemical interactions

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_002727597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_002727597   ⟹   XP_002727643
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
CeleraX51,391,548 - 51,392,577 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_002727643 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_002727643   ⟸   XM_002727597
- Sequence:

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000050510 Ensembl
NCBI Gene 100363782 ENTREZGENE
PhenoGen LOC100363782 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-05-06 LOC100363782  RAB1B, member RAS oncogene family-like      Symbol and Name status set to provisional 70820 PROVISIONAL