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Gene: Shisa9 (shisa family member 9) Rattus norvegicus
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Symbol: Shisa9
Name: shisa family member 9
Description: Predicted to have PDZ domain binding activity. Predicted to be involved in regulation of AMPA receptor activity; regulation of postsynaptic neurotransmitter receptor activity; and regulation of short-term neuronal synaptic plasticity. Predicted to localize to the AMPA glutamate receptor complex; glutamatergic synapse; and synaptic membrane. Orthologous to human SHISA9 (shisa family member 9); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 5-fluorouracil (ortholog); aflatoxin M1 (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100361134; LOW QUALITY PROTEIN: protein shisa-9; shisa homolog 9; shisa homolog 9 (Xenopus laevis); shisa homolog 9-like
Orthologs:
Homo sapiens (human) : SHISA9 (shisa family member 9)  HGNC  Alliance
Mus musculus (house mouse) : Shisa9 (shisa family member 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Shisa9 (shisa family member 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SHISA9 (shisa family member 9)
Canis lupus familiaris (dog) : SHISA9 (shisa family member 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Shisa9 (shisa family member 9)
Sus scrofa (pig) : SHISA9 (shisa family member 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0102,777,675 - 3,072,842 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0101,658,327 - 1,940,603 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4103,152,124 - 3,177,530 (-)NCBIRGSC3.4rn4RGSC3.4
Celera102,370,352 - 2,661,832 (-)NCBICelera
Cytogenetic Map10q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Shisa9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2320726
Created: 2010-05-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.