Gene: Insyn2b (inhibitory synaptic factor family member 2B) Rattus norvegicus
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Symbol:
Insyn2b
Name:
inhibitory synaptic factor family member 2B
RGD ID:
2320105
Description:
Orthologous to human INSYN2B (inhibitory synaptic factor family member 2B); INTERACTS WITH bisphenol A; 1,2-dichloroethane (ortholog); benzo[a]pyrene (ortholog).
Type:
protein-coding
RefSeq Status:
MODEL
Also known as:
Fam196b; family with sequence similarity 196, member B; hypothetical protein LOC100361460; LOC100361460
RGD Orthologs
Alliance Genes
More Info
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More Info
Species
Gene symbol and name
Data Source
Assertion derived from
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Orthologs 1
Homo sapiens (human):
INSYN2B (inhibitory synaptic factor family member 2B)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Insyn2b (inhibitory synaptic factor family member 2B)
HGNC
Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):
Insyn2b (inhibitory synaptic factor family member 2B)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
INSYN2B (inhibitory synaptic factor family member 2B)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
INSYN2B (inhibitory synaptic factor family member 2B)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Insyn2b (inhibitory synaptic factor family member 2B)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
INSYN2B (inhibitory synaptic factor family member 2B)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):
INSYN2B (inhibitory synaptic factor family member 2B)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Insyn2b (inhibitory synaptic factor family member 2B)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
INSYN2B (inhibitory synaptic factor family member 2B)
Alliance
DIOPT (HGNC)
Latest Assembly:
Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl mRatBN7.2 10 18,916,721 - 19,023,859 (+) NCBI Rnor_6.0 10 19,270,956 - 19,392,214 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 10 19,149,321 - 19,265,167 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 19,383,104 - 19,401,226 (+) NCBI RGSC3.4 rn4 RGSC3.4 Celera 10 18,549,000 - 18,660,453 (+) NCBI Celera Cytogenetic Map 10 q12 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
References
Genomics
Comparative Map Data
Insyn2b (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl mRatBN7.2 10 18,916,721 - 19,023,859 (+) NCBI Rnor_6.0 10 19,270,956 - 19,392,214 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 10 19,149,321 - 19,265,167 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 19,383,104 - 19,401,226 (+) NCBI RGSC3.4 rn4 RGSC3.4 Celera 10 18,549,000 - 18,660,453 (+) NCBI Celera Cytogenetic Map 10 q12 NCBI
INSYN2B (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38.p13 Ensembl 5 169,861,303 - 169,980,495 (-) Ensembl GRCh38 hg38 GRCh38 GRCh38 5 169,861,303 - 169,980,508 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh37 5 169,288,307 - 169,407,499 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 5 169,223,297 - 169,340,322 (-) NCBI NCBI36 hg18 NCBI36 Celera 5 165,322,310 - 165,439,373 (-) NCBI Cytogenetic Map 5 q35.1 NCBI HuRef 5 164,388,897 - 164,505,800 (-) NCBI HuRef CHM1_1 5 168,723,110 - 168,840,179 (-) NCBI CHM1_1
Insyn2b (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 34,264,822 - 34,372,642 (+) NCBI GRCm39 mm39 GRCm39 Ensembl 11 34,264,758 - 34,372,640 (+) Ensembl GRCm38 11 34,314,822 - 34,422,642 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 34,314,758 - 34,422,640 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 34,214,822 - 34,322,640 (+) NCBI GRCm37 mm9 NCBIm37 MGSCv36 11 34,214,822 - 34,322,640 (+) NCBI mm8 Celera 11 36,726,207 - 36,834,375 (+) NCBI Celera Cytogenetic Map 11 A4 NCBI
Insyn2b (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955408 22,841,584 - 22,863,256 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955408 22,842,645 - 22,864,156 (-) NCBI ChiLan1.0 ChiLan1.0
INSYN2B (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl PanPan1.1 5 171,987,796 - 172,105,936 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 5 171,988,980 - 172,009,754 (-) Ensembl panpan1.1 panPan2 Mhudiblu_PPA_v0 5 165,227,463 - 165,346,288 (-) NCBI Mhudiblu_PPA_v0 panPan3
INSYN2B (Canis lupus familiaris - dog)
Insyn2b (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
INSYN2B (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 16 53,941,568 - 54,057,671 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 16 53,939,487 - 54,057,671 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 16 58,457,046 - 58,507,714 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
INSYN2B (Chlorocebus sabaeus - African green monkey)
Vervet Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 23 72,078,442 - 72,197,715 (-) NCBI ChlSab1.1 Ensembl 23 72,080,294 - 72,100,012 (-) Ensembl
Insyn2b (Heterocephalus glaber - naked mole-rat)
Molerat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HetGla 1.0 NW_004624733 19,982,815 - 20,099,782 (+) NCBI
QTLs in Region (Rnor_6.0)
2303118 Mamtr7 Mammary tumor resistance QTL 7 0.003 mammary gland integrity trait (VT:0010552) mammary tumor growth rate (CMO:0000344) 10 9841807 108540162 Rat 2298544 Neuinf9 Neuroinflammation QTL 9 4.6 nervous system integrity trait (VT:0010566) spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126) 10 5877536 64401490 Rat 631268 Cia21 Collagen induced arthritis QTL 21 3.1 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 14827894 107857673 Rat 1576304 Schws7 Schwannoma susceptibility QTL 7 0.0115 nervous system integrity trait (VT:0010566) percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017) 10 4835638 20170031 Rat 737820 Alc9 Alcohol consumption QTL 9 2.2 consumption behavior trait (VT:0002069) ethanol drink intake rate (CMO:0001407) 10 5217199 19591669 Rat 737823 Alc12 Alcohol consumption QTL 12 4.5 consumption behavior trait (VT:0002069) ethanol drink intake rate (CMO:0001407) 10 17555386 19743866 Rat 631564 Apr3 Acute phase response QTL 3 3.9 blood interleukin-6 amount (VT:0008595) plasma interleukin-6 level (CMO:0001927) 10 16468736 61468736 Rat 631660 Hcar1 Hepatocarcinoma resistance QTL 1 3.4 0.0001 liver integrity trait (VT:0010547) volume of individual liver tumorous lesion (CMO:0001078) 10 6229289 36185929 Rat 631532 Cm50 Cardiac mass QTL 50 6.6 heart mass (VT:0007028) calculated heart weight (CMO:0000073) 10 18246394 53637634 Rat 2293680 Bss40 Bone structure and strength QTL 40 5.66 0.0001 femur strength trait (VT:0010010) femur total energy absorbed before break (CMO:0001677) 10 1 35538813 Rat 631554 Bp133 Blood pressure QTL 133 0.005 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 764421 66221621 Rat 634327 Hc4 Hypercalciuria QTL 4 2.4 urine calcium amount (VT:0002985) urine calcium excretion rate (CMO:0000763) 10 1 38594330 Rat 1578761 Stresp21 Stress response QTL 21 3.3 thymus mass (VT:0004954) thymus wet weight (CMO:0000855) 10 7521450 52521450 Rat 2301967 Cm73 Cardiac mass QTL 73 4.55 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 10 14827894 92423564 Rat 2316949 Gluco60 Glucose level QTL 60 3.7 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 10 14827894 110992275 Rat 2313064 Bmd71 Bone mineral density QTL 71 0.9 0.0001 tibia mineral mass (VT:1000283) cortical volumetric bone mineral density (CMO:0001730) 10 5460119 21524070 Rat 2313066 Bss63 Bone structure and strength QTL 63 1.4 0.0001 tibia strength trait (VT:1000284) bone polar moment of inertia (CMO:0001558) 10 5460119 21524070 Rat 2313081 Bss64 Bone structure and strength QTL 64 1.3 0.0001 tibia strength trait (VT:1000284) tibia total energy absorbed before break (CMO:0001736) 10 5460119 21524070 Rat 2313095 Bss62 Bone structure and strength QTL 62 1.5 0.0001 tibia size trait (VT:0100001) tibia midshaft cross-sectional area (CMO:0001717) 10 5460119 21524070 Rat 2313104 Bss61 Bone structure and strength QTL 61 0.9 0.0001 tibia area (VT:1000281) tibia midshaft cross-sectional area (CMO:0001717) 10 5460119 21524070 Rat 1354587 Kidm21 Kidney mass QTL 21 3.3 kidney mass (VT:0002707) right kidney wet weight (CMO:0000082) 10 15375474 62469074 Rat 61427 Cia16 Collagen induced arthritis QTL 16 3.2 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 6429075 99492409 Rat 6893350 Bw99 Body weight QTL 99 0.87 0.16 body mass (VT:0001259) body weight (CMO:0000012) 1 17121542 62121542 Rat 6893352 Bw100 Body weight QTL 100 0.33 0.6 body mass (VT:0001259) body weight (CMO:0000012) 1 17121542 62121542 Rat 9590310 Scort19 Serum corticosterone level QTL 19 6.3 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 10 12639513 57639513 Rat 7387235 Uae41 Urinary albumin excretion QTL 41 5.26 0.1874 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 10 1 29592136 Rat 9590268 Scort13 Serum corticosterone level QTL 13 3.26 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 10 12639513 57639513 Rat 7411611 Foco17 Food consumption QTL 17 18.7 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 10 1 42669970 Rat 8662860 Vetf10 Vascular elastic tissue fragility QTL 10 artery integrity trait (VT:0010639) number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562) 10 6229095 75983805 Rat 9589136 Insul27 Insulin level QTL 27 10.46 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 10 12639513 57639513 Rat 10401803 Kidm50 Kidney mass QTL 50 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 10 1 44902893 Rat