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Gene: Pdss1 (decaprenyl diphosphate synthase subunit 1) Rattus norvegicus
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Symbol: Pdss1
Name: decaprenyl diphosphate synthase subunit 1
RGD ID: 2319976
Description: Predicted to contribute to trans-hexaprenyltranstransferase activity and trans-octaprenyltranstransferase activity. Predicted to be involved in isoprenoid biosynthetic process and ubiquinone biosynthetic process. Predicted to localize to mitochondrion and transferase complex. Human ortholog(s) of this gene implicated in primary coenzyme Q10 deficiency 2. Orthologous to human PDSS1 (decaprenyl diphosphate synthase subunit 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; glyphosate; 1,2-dimethylhydrazine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: COenzyme Q (ubiquinone) biosynthesis family member (coq-1)-like; decaprenyl-diphosphate synthase subunit 1; LOC100364990; prenyl (decaprenyl) diphosphate synthase, subunit 1
Orthologs:
Homo sapiens (human) : PDSS1 (decaprenyl diphosphate synthase subunit 1)  HGNC  Alliance
Mus musculus (house mouse) : Pdss1 (prenyl (solanesyl) diphosphate synthase, subunit 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdss1 (decaprenyl diphosphate synthase subunit 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PDSS1 (decaprenyl diphosphate synthase subunit 1)
Canis lupus familiaris (dog) : PDSS1 (decaprenyl diphosphate synthase subunit 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdss1 (decaprenyl diphosphate synthase subunit 1)
Sus scrofa (pig) : PDSS1 (decaprenyl diphosphate synthase subunit 1)
Chlorocebus sabaeus (African green monkey) : PDSS1 (decaprenyl diphosphate synthase subunit 1)
Heterocephalus glaber (naked mole-rat) : Pdss1 (decaprenyl diphosphate synthase subunit 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01790,033,432 - 90,072,506 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1790,033,539 - 90,071,408 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01791,698,837 - 91,736,565 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1783,796,677 - 83,835,554 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pdss1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2319976
Created: 2010-05-05
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.