Cellular Component Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | cytoplasm | is_active_in | IBA | MGI:1918325 more ... | 1600115 | GO_REF:0000033 | GO_Central | GO_REF:0000033 | |
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Cellular Component Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | cytoplasm | is_active_in | IBA | MGI:1918325 more ... | 1600115 | GO_REF:0000033 | GO_Central | GO_REF:0000033 | |
# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
.
Variants in Rimklbl1
3 total Variants |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
alimentary part of gastrointestinal system | circulatory system | endocrine system | hemolymphoid system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||
Medium | |||||||||||
Low | 1 | 7 | 1 | 1 | |||||||
Below cutoff | 2 | 3 | 5 | 1 | 3 | 13 | 8 | 11 | 7 | 1 |
RefSeq Acc Id: | ENSRNOT00000055433 ⟹ ENSRNOP00000052301 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039108939 ⟹ XP_038964867 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Protein RefSeqs | XP_038964867 | (Get FASTA) | NCBI Sequence Viewer |
Ensembl Protein | ENSRNOP00000052301 | ||
ENSRNOP00000052301.1 | |||
ENSRNOP00000090575.1 |
RefSeq Acc Id: | ENSRNOP00000052301 ⟸ ENSRNOT00000055433 |
RefSeq Acc Id: | XP_038964867 ⟸ XM_039108939 |
- UniProtKB: | D4ADZ3 (UniProtKB/TrEMBL), A0A8I6A9U5 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-D4ADZ3-F1-model_v2 | AlphaFold | D4ADZ3 | 1-387 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:2318342 | AgrOrtholog |
BioCyc Gene | G2FUF-42346 | BioCyc |
Ensembl Genes | ENSRNOG00000036910 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
ENSRNOG00000064238 | UniProtKB/TrEMBL | |
Ensembl Transcript | ENSRNOT00000055433.2 | UniProtKB/TrEMBL |
ENSRNOT00000104857.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.30.1490.20 | UniProtKB/TrEMBL |
3.40.50.20 | UniProtKB/TrEMBL | |
ATP-grasp fold, B domain | UniProtKB/TrEMBL | |
InterPro | ATP-grasp | UniProtKB/TrEMBL |
ATP-grasp_RimK-type | UniProtKB/TrEMBL | |
ATP_grasp_subdomain_1 | UniProtKB/TrEMBL | |
RimK_fam | UniProtKB/TrEMBL | |
NCBI Gene | 100362344 | ENTREZGENE |
PANTHER | BETA-CITRYLGLUTAMATE SYNTHASE B | UniProtKB/TrEMBL |
RIBOSOMAL PROTEIN S6 MODIFICATION PROTEIN | UniProtKB/TrEMBL | |
Pfam | RimK | UniProtKB/TrEMBL |
PhenoGen | Rimklbl1 | PhenoGen |
PROSITE | ATP_GRASP | UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000036910 | RatGTEx |
ENSRNOG00000064238 | RatGTEx | |
Superfamily-SCOP | Glutathione synthetase ATP-binding domain-like | UniProtKB/TrEMBL |
UniProt | A0A8I6A9U5 | ENTREZGENE, UniProtKB/TrEMBL |
D4ADZ3 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2023-09-19 | Rimklbl1 | ribosomal modification protein rimK-like family member B like 1 | LOC100362344 | mKIAA1238 protein-like | Symbol and Name Changed | 1299863 | APPROVED |
2010-05-05 | LOC100362344 | mKIAA1238 protein-like | Symbol and Name status set to provisional | 70820 | PROVISIONAL |