Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Mir489 (microRNA 489) Rattus norvegicus
Analyze
Symbol: Mir489
Name: microRNA 489
RGD ID: 2314886
Description: Predicted to be involved in cellular response to leukemia inhibitory factor; gene silencing by miRNA; and myoblast differentiation involved in skeletal muscle regeneration. Orthologous to human MIR489 (microRNA 489); INTERACTS WITH aristolochic acid; bis(2-ethylhexyl) phthalate; furan.
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: microRNA mir-489; rno-mir-489
Orthologs:
Homo sapiens (human) : MIR489 (microRNA 489)  HGNC  Alliance
Mus musculus (house mouse) : Mir489 (microRNA 489)  MGI  Alliance
Canis lupus familiaris (dog) : MIR489 (microRNA mir-489)
Sus scrofa (pig) : MIR489 (microRNA mir-489)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0428,659,523 - 28,659,628 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl428,659,523 - 28,659,628 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0428,564,161 - 28,564,266 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4428,518,260 - 28,518,365 (-)NCBIRGSC3.4rn4RGSC3.4
Celera427,079,905 - 27,080,010 (-)NCBICelera
Cytogenetic Map4q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
  
More on Mir489
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2314886
Created: 2009-12-04
Species: Rattus norvegicus
Last Modified: 2020-10-27
Status: ACTIVE



Contact Us |  About Us |  License CC BY 4.0 |  Legal Disclaimer |  © Medical College of Wisconsin
NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.