Mir467e (microRNA 467e) - Rat Genome Database
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Gene: Mir467e (microRNA 467e) Mus musculus
Analyze
Symbol: Mir467e
Name: microRNA 467e
RGD ID: 2314095
MGI Page MGI
Description: Localizes to RISC complex.
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: Mirn4; Mirn467e
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39210,510,532 - 10,510,618 (+)NCBIGRCm39mm39
GRCm38210,505,721 - 10,505,807 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl210,505,721 - 10,505,807 (+)EnsemblGRCm38mm10GRCm38
Celera210,431,470 - 10,431,546 (+)NCBICelera
Cytogenetic Map2A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
RISC complex  (IDA)

References
Additional References at PubMed
PMID:16381832   PMID:17604727   PMID:20215419   PMID:20413612   PMID:21267068   PMID:23185045  


Genomics


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045633Heal15_mwound healing/regeneration 15 (mouse)Not determined2121984831Mouse
4142333Tgq10_mtriglyceride QTL 10 (mouse)Not determined125319748Mouse
4141836Tgq11_mtriglyceride QTL 11 (mouse)Not determined125319748Mouse
1301838Sluc16_msusceptibility to lung cancer 16 (mouse)Not determined2126524778Mouse
12904743Carcdq3_mcardiac collagen deposition QTL 3 (mouse)2323390328289138Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388608993591306Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2778910341789249Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2834628442346384Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2841803942418228Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2949443443494563Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2949443443494563Mouse
12903993Opfaq1_mopen field activity QTL 1 (mouse)2967188027132630Mouse

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:22489
Count of gene targets:8529
Count of transcripts:13680
Interacting mature miRNAs:mmu-miR-467e-3p, mmu-miR-467e-5p
Prediction methods:Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NR_030645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL772216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000103760
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl210,505,721 - 10,505,807 (+)Ensembl
RefSeq Acc Id: NR_030645
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39210,510,532 - 10,510,618 (+)NCBI
GRCm38210,505,721 - 10,505,807 (+)NCBI
Celera210,431,470 - 10,431,546 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000076948 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000103760 ENTREZGENE
MGD MGI:3718541 ENTREZGENE
miRBase MI0006128 ENTREZGENE
NCBI Gene 100124448 ENTREZGENE
PhenoGen Mir467e PhenoGen
RNAcentral URS0000547066 RNACentral
  URS00005CC853 RNACentral
  URS000075D0CC RNACentral