Nme9 (NME/NM23 family member 9) - Rat Genome Database
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Gene: Nme9 (NME/NM23 family member 9) Mus musculus
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Symbol: Nme9
Name: NME/NM23 family member 9
RGD ID: 2313605
MGI Page MGI
Description: Orthologous to human NME9 (NME/NM23 family member 9); INTERACTS WITH 1,2-dichloroethane; 4,4'-sulfonyldiphenol; bisphenol F.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: thioredoxin domain containing 6; thioredoxin domain-containing protein 6; Txndc; Txndc6
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39999,338,296 - 99,361,952 (+)NCBIGRCm39mm39
GRCm38999,456,243 - 99,479,899 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl999,451,475 - 99,474,751 (+)EnsemblGRCm38mm10GRCm38
MGSCv37999,356,662 - 99,380,318 (+)NCBIGRCm37mm9NCBIm37
MGSCv36999,261,243 - 99,280,883 (+)NCBImm8
Celera998,991,693 - 99,014,756 (+)NCBICelera
Cytogenetic Map9E3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12569107  


Genomics

Comparative Map Data
Nme9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39999,338,296 - 99,361,952 (+)NCBIGRCm39mm39
GRCm38999,456,243 - 99,479,899 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl999,451,475 - 99,474,751 (+)EnsemblGRCm38mm10GRCm38
MGSCv37999,356,662 - 99,380,318 (+)NCBIGRCm37mm9NCBIm37
MGSCv36999,261,243 - 99,280,883 (+)NCBImm8
Celera998,991,693 - 99,014,756 (+)NCBICelera
Cytogenetic Map9E3.3NCBI
NME9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3138,261,437 - 138,329,886 (-)EnsemblGRCh38hg38GRCh38
GRCh383138,261,436 - 138,331,785 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh373137,980,279 - 138,049,018 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363139,462,969 - 139,531,418 (-)NCBINCBI36hg18NCBI36
Build 343139,462,976 - 139,531,426NCBI
Celera3136,405,167 - 136,473,614 (-)NCBI
Cytogenetic Map3q22.3NCBI
HuRef3135,355,341 - 135,423,786 (-)NCBIHuRef
CHM1_13137,944,061 - 138,012,504 (-)NCBICHM1_1
Nme9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08107,698,612 - 107,720,758 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08107,124,393 - 107,145,676 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48104,318,431 - 104,335,452 (+)NCBIRGSC3.4rn4RGSC3.4
Celera899,414,228 - 99,435,674 (+)NCBICelera
Cytogenetic Map8q31NCBI
Nme9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955501684,013 - 703,001 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955501684,307 - 703,199 (+)NCBIChiLan1.0ChiLan1.0
NME9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13142,780,006 - 142,808,880 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3142,780,510 - 142,808,817 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03135,330,855 - 135,361,599 (-)NCBIMhudiblu_PPA_v0panPan3
NME9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2334,483,520 - 34,537,312 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12334,515,003 - 34,537,386 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Nme9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936540608,139 - 649,754 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NME9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1379,089,189 - 79,114,506 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11379,083,604 - 79,114,959 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21386,694,373 - 86,714,090 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NME9
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl1552,212,905 - 52,242,271 (+)Ensembl
ChlSab1.11552,212,974 - 52,271,540 (+)NCBI
Nme9
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473014,804,025 - 14,831,271 (-)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49541121101528921Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95212317899910428Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1301636Lith5_mlithogenic gene 5 (mouse)Not determined966207024100207122Mouse
10045638Heal29_mwound healing/regeneration 29 (mouse)Not determined967124167101124167Mouse
1357610Vtbt8_mvertebral trabecular bone trait 8 (mouse)Not determined968897510102897652Mouse
1301924Bmd10_mbone mineral density 10 (mouse)Not determined968897510102897652Mouse
1301302Pas4_mpulmonary adenoma susceptibility 4 (mouse)Not determined969239845103239920Mouse
1301621Hpic1_mhaloperidol-induced catalepsy 1 (mouse)Not determined969546513103546645Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972977005106977152Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972977005106977152Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974368177108368325Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301869Tbbmd4_mtotal body bone mineral density 4 (mouse)Not determined976117105101528921Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: NM_001165957   ⟹   NP_001159429
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39999,338,296 - 99,361,952 (+)NCBI
GRCm38999,456,243 - 99,479,899 (+)ENTREZGENE
MGSCv37999,356,662 - 99,380,318 (+)RGD
Celera998,991,693 - 99,014,756 (+)RGD
cM Map9 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001159429 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001159429   ⟸   NM_001165957
- Sequence:
Protein Domains
NDK


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:4359686 AgrOrtholog
Ensembl Genes ENSMUSG00000046242 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000150820 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000163199 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.141 UniProtKB/TrEMBL
  3.40.30.10 UniProtKB/TrEMBL
InterPro NDK-like_dom UniProtKB/TrEMBL
  NDK-like_dom_sf UniProtKB/TrEMBL
  Nucleoside_diP_kinase UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/TrEMBL
  Thioredoxin_CS UniProtKB/TrEMBL
  Thioredoxin_domain UniProtKB/TrEMBL
MGD MGI:4359686 ENTREZGENE
NCBI Gene 623534 ENTREZGENE
Pfam NDK UniProtKB/TrEMBL
  Thioredoxin UniProtKB/TrEMBL
PhenoGen Nme9 PhenoGen
PRINTS NUCDPKINASE UniProtKB/TrEMBL
PROSITE THIOREDOXIN_1 UniProtKB/TrEMBL
SMART NDK UniProtKB/TrEMBL
Superfamily-SCOP SSF52833 UniProtKB/TrEMBL
  SSF54919 UniProtKB/TrEMBL
UniGene Mm.484967 ENTREZGENE
UniProt A0A1L1SUL6_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-16 Nme9  NME/NM23 family member 9  NME9    Symbol and/or name change 5135510 APPROVED
2012-06-05 NME9  NME/NM23 family member 9  Txndc6  thioredoxin domain containing 6  Symbol and/or name change 5135510 APPROVED