Gm11803 (predicted gene 11803) - Rat Genome Database

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Gene: Gm11803 (predicted gene 11803) Mus musculus
Analyze
Symbol: Gm11803
Name: predicted gene 11803
RGD ID: 2312214
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3946,507,914 - 6,508,455 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl46,507,941 - 6,508,384 (-)EnsemblGRCm39 Ensembl
GRCm3846,507,914 - 6,508,455 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl46,507,941 - 6,508,384 (-)EnsemblGRCm38mm10GRCm38
MGSCv3746,435,061 - 6,435,531 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3646,435,061 - 6,435,531 (-)NCBIMGSCv36mm8
Celera46,419,552 - 6,420,022 (-)NCBICelera
Cytogenetic Map4A1NCBI
cM Map42.96NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm11803
28 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:54
Count of miRNA genes:54
Interacting mature miRNAs:54
Transcripts:ENSMUST00000119966
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11049579Lmr9b_mleishmaniasis resistance 9b (mouse)4120657234Mouse
11049580Lmr9a_mleishmaniasis resistance 9 (mouse)4120657234Mouse
1301274Lmr9_mleishmaniasis resistance 9 (mouse)Not determined4120657234Mouse
10412079Sm1_msusceptibility to Schistosoma mansoni infection 1 (mouse)Not determined4122955614Mouse
1301510Bbaa13_mB.burgdorferi-associated arthritis 13 (mouse)Not determined4126395649Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide AL807238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000119966
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl46,507,941 - 6,508,384 (-)Ensembl
GRCm38.p6 Ensembl46,507,941 - 6,508,384 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000081913 Ensembl, ENTREZGENE
MGD MGI:3650653 ENTREZGENE
NCBI Gene Gm11803 ENTREZGENE
PhenoGen Gm11803 PhenoGen