Gm7485 (predicted gene 7485) - Rat Genome Database

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Gene: Gm7485 (predicted gene 7485) Mus musculus
Analyze
Symbol: Gm7485
Name: predicted gene 7485
RGD ID: 2312204
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG665087
Related Functional Gene: Aldoa  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X117,607,319 - 117,608,746 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX117,607,492 - 117,608,600 (-)EnsemblGRCm39 Ensembl
GRCm38X118,697,622 - 118,699,049 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX118,697,795 - 118,698,903 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X115,811,231 - 115,812,658 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X114,814,739 - 114,840,574 (-)NCBIMGSCv36mm8
CeleraX105,357,324 - 105,358,751 (-)NCBICelera
Cytogenetic MapXE1NCBI
cM MapX49.58NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm7485
27 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:229
Count of miRNA genes:211
Interacting mature miRNAs:218
Transcripts:ENSMUST00000119502
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_017951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL928682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000119502
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX117,607,492 - 117,608,600 (-)Ensembl
GRCm38.p6 EnsemblX118,697,795 - 118,698,903 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000081171 Ensembl
MGD MGI:3644059 ENTREZGENE
NCBI Gene 665087 ENTREZGENE
PhenoGen Gm7485 PhenoGen