Gm15016 (predicted gene 15016) - Rat Genome Database

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Gene: Gm15016 (predicted gene 15016) Mus musculus
Analyze
Symbol: Gm15016
Name: predicted gene 15016
RGD ID: 2311827
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 EnsemblX134,889,296 - 134,890,015 (+)EnsemblGRCm39 Ensembl
GRCm38X135,987,609 - 135,989,581 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX135,988,547 - 135,989,266 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X132,512,848 - 132,523,811 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X132,512,848 - 132,523,811 (+)NCBIMGSCv36mm8
cM MapX57.35NCBI


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:69
Count of miRNA genes:69
Interacting mature miRNAs:69
Transcripts:ENSMUST00000117300
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
DXMit233  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X135,981,553 - 135,981,667UniSTSGRCm38
MGSCv37X132,516,092 - 132,516,206UniSTSGRCm37
CeleraX119,297,663 - 119,297,777UniSTS
Cytogenetic MapXF1UniSTS
cM MapX51.0UniSTS
Whitehead GeneticX43.7UniSTS
Whitehead/MRC_RHX1534.22UniSTS
Whitehead_YACX UniSTS


Expression


Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSMUST00000117300
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX134,889,296 - 134,890,015 (+)Ensembl
GRCm38.p6 EnsemblX135,988,547 - 135,989,266 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000083223 Ensembl
MGD MGI:3705629 ENTREZGENE
NCBI Gene Gm15016 ENTREZGENE
PhenoGen Gm15016 PhenoGen