Gm2390 (predicted gene 2390) - Rat Genome Database

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Gene: Gm2390 (predicted gene 2390) Mus musculus
Analyze
Symbol: Gm2390
Name: predicted gene 2390
RGD ID: 2310555
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: 100039725
Related Functional Gene: Wdr53  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391884,730,656 - 84,731,789 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1884,730,701 - 84,731,597 (+)EnsemblGRCm39 Ensembl
GRCm381884,712,531 - 84,713,664 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1884,712,576 - 84,713,472 (+)EnsemblGRCm38mm10GRCm38
MGSCv371884,881,949 - 84,883,050 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361884,881,968 - 84,883,033 (+)NCBIMGSCv36mm8
Celera1885,776,768 - 85,777,869 (+)NCBICelera
Cytogenetic Map18E4NCBI
cM Map1857.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm2390
48 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357630Tgq1_mtriglyceride QTL 1 (mouse)Not determined185105215685052311Mouse
11252137Modvl5_mmodifier of vacuolated lens 5 (mouse)185105215685052311Mouse
10412244Par5_mpulmonary adenoma resistance 5 (mouse)Not determined185166830085668468Mouse
1302099Hdlq30_mHDL QTL 30 (mouse)Not determined185166830085668468Mouse
1301853Heal9_mwound healing/regeneration 9 (mouse)Not determined185280527686805416Mouse
1301500Szs4_mseizure susceptibility 4 (mouse)Not determined185497587385514143Mouse
12880410V125Dq13_mvitamin D active form serum level QTL 13 (mouse)185643307190433071Mouse
12880430Fgf23lq4_mFGF23 serum level QTL 4 (mouse)185643307190433071Mouse
12880428V125Dq14_mvitamin D active form serum level QTL 14 (mouse)185743307190720763Mouse
1301353Lbw6_mlupus NZB x NZW 6 (mouse)Not determined185756233890720763Mouse
4140971Mbmq1_mmale body mass QTL 1 (mouse)Not determined5799028190720763Mouse
11049564Lmr29_mleishmaniasis resistance 29 (mouse)185918009290720763Mouse
11039495Ltpr8c_mLeishmania tropica response 8c (mouse)185918009290720763Mouse
11039492Ltpr8a_mLeishmania tropica response 8a (mouse)185918009290720763Mouse
1301103Pgia11_mproteoglycan induced arthritis 11 (mouse)Not determined185991418490720763Mouse
1302109Sluc28_msusceptibility to lung cancer 28 (mouse)Not determined185993532190720763Mouse
1301798Hdlq31_mHDL QTL 31 (mouse)Not determined186714438990720763Mouse
10401904Sicd4_mseizure-induced cell death 4 (mouse)Not determined186980527685514143Mouse
15014786Mvlq2_mmacrovesicular liver lesion QTL 2 (mouse)187156938890720763Mouse
4141757Sicd1_mseizure-induced cell death 1 (mouse)Not determined188017526489590914Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_020180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC142448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000237194
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1884,730,701 - 84,731,597 (+)Ensembl
GRCm38.p6 Ensembl1884,712,576 - 84,713,472 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000118152 Ensembl
MGD MGI:3780558 ENTREZGENE
NCBI Gene 100039725 ENTREZGENE
PhenoGen Gm2390 PhenoGen