Gm5204 (predicted gene 5204) - Rat Genome Database

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Gene: Gm5204 (predicted gene 5204) Mus musculus
Analyze
Symbol: Gm5204
Name: predicted gene 5204
RGD ID: 2310004
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: EG382872
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391437,514,169 - 37,634,557 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1437,633,805 - 37,634,655 (-)EnsemblGRCm39 Ensembl
GRCm381437,792,212 - 37,912,600 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1437,911,848 - 37,912,698 (-)EnsemblGRCm38mm10GRCm38
MGSCv371438,605,398 - 38,725,899 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361436,823,415 - 36,824,490 (-)NCBIMGSCv36mm8
Celera1433,987,733 - 34,104,817 (-)NCBICelera
Cytogenetic Map14BNCBI
cM Map1422.18NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm5204
3733 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301991Wta3_mweight adult 3 (mouse)Not determined14388747337887650Mouse
4141550Dbm3_mdiabetes modifier 3 (mouse)Not determined514347339143596Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide AC098706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT573047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000223652
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1437,633,805 - 37,634,655 (-)Ensembl
GRCm38.p6 Ensembl1437,911,848 - 37,912,698 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000114227 Ensembl, ENTREZGENE
MGD MGI:3643898 ENTREZGENE
NCBI Gene 382872 ENTREZGENE
PhenoGen Gm5204 PhenoGen