Gm9603 (predicted gene 9603) - Rat Genome Database

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Gene: Gm9603 (predicted gene 9603) Mus musculus
Analyze
No known orthologs.
Symbol: Gm9603
Name: predicted gene 9603
RGD ID: 2307894
MGI Page MGI
Description:
Type: gene (Ensembl: protein-coding)
RefSeq Status: MODEL
Previously known as: 673685
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391416,782,396 - 16,789,740 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1416,782,316 - 16,790,989 (+)EnsemblGRCm39 Ensembl
GRCm38145,680,034 - 5,687,377 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl145,678,784 - 5,687,457 (-)EnsemblGRCm38mm10GRCm38
MGSCv37145,429,091 - 5,437,766 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36145,429,091 - 5,437,766 (-)NCBIMGSCv36mm8
Cytogenetic Map14A2NCBI
cM Map142.88NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Gm9603
264 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:280
Count of miRNA genes:241
Interacting mature miRNAs:259
Transcripts:ENSMUST00000165814
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412071Ssen3_msuseptibility to Sendai virus 3 (mouse)Not determined14126987934Mouse
11532711Sluc40_msusceptibility to lung cancer 40 (mouse)14127379943Mouse
13824988Phsq1_mpercent hyperactivated sperm QTL 1 (mouse)14305000119469772Mouse
1301991Wta3_mweight adult 3 (mouse)Not determined14388747337887650Mouse
4141550Dbm3_mdiabetes modifier 3 (mouse)Not determined514347339143596Mouse
4141265Appd2_mAPP associated premature death 2 (mouse)Not determined14594555230114862Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_001781353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC168071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000165814   ⟹   ENSMUSP00000126547
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1416,782,316 - 16,790,989 (+)Ensembl
GRCm38.p6 Ensembl145,678,784 - 5,687,457 (-)Ensembl
RefSeq Acc Id: XR_001781353
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391416,782,396 - 16,789,740 (+)NCBI
GRCm38145,680,034 - 5,687,377 (-)NCBI
Sequence:
Protein Sequences
Ensembl Protein ENSMUSP00000126547.2
  ENSMUSP00000127565.2
Reference Protein Sequences
RefSeq Acc Id: ENSMUSP00000126547   ⟸   ENSMUST00000165814
Protein Domains
Disks large homolog 5 N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-K7N6U2-F1-model_v2 AlphaFold K7N6U2 1-270 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3780011 AgrOrtholog
Ensembl Genes ENSMUSG00000096023 UniProtKB/TrEMBL
  ENSMUSG00000096470 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000165814.2 UniProtKB/TrEMBL
  ENSMUST00000169362.2 UniProtKB/TrEMBL
InterPro DUF622 UniProtKB/TrEMBL
MGD MGI:3780011 ENTREZGENE
NCBI Gene 673685 ENTREZGENE
PANTHER 2610042L04RIK PROTEIN-RELATED UniProtKB/TrEMBL
  SPEER/SPETEX UniProtKB/TrEMBL
Pfam Takusan UniProtKB/TrEMBL
PhenoGen Gm9603 PhenoGen
UniProt K7N6U2_MOUSE UniProtKB/TrEMBL