Gm5881 (predicted gene 5881) - Rat Genome Database
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Gene: Gm5881 (predicted gene 5881) Mus musculus
Analyze
Symbol: Gm5881
Name: predicted gene 5881
RGD ID: 2306730
MGI Page MGI
Description:
Type: pseudo
RefSeq Status: INFERRED
Also known as: 545867
Related Functional Gene: Calm2  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39696,009,978 - 96,010,351 (-)NCBIGRCm39mm39
GRCm39 Ensembl696,009,984 - 96,010,350 (-)Ensembl
GRCm38696,032,997 - 96,033,370 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl696,033,003 - 96,033,369 (-)EnsemblGRCm38mm10GRCm38
MGSCv37695,982,991 - 95,983,364 (-)NCBIGRCm37mm9NCBIm37
MGSCv36695,982,854 - 95,991,694 (-)NCBImm8
Celera697,911,347 - 97,911,720 (-)NCBICelera
Cytogenetic Map6D3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Position Markers
MARC_7076-7077:992008234:1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38716,916,819 - 16,917,168UniSTSGRCm38
GRCm38696,032,870 - 96,033,121UniSTSGRCm38
MGSCv37695,982,864 - 95,983,115UniSTSGRCm37
MGSCv37717,502,168 - 17,502,517UniSTSGRCm37
Celera714,123,249 - 14,123,598UniSTS
Celera697,911,220 - 97,911,471UniSTS
Cytogenetic Map6D3UniSTS
Cytogenetic Map7A2UniSTS
cM Map74.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
11532719Sluc45_msusceptibility to lung cancer 45 (mouse)69260730698258933Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92607306112004738Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_011926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC148987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000204737
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl696,033,003 - 96,033,369 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000107747 Ensembl, ENTREZGENE
MGD MGI:3779532 ENTREZGENE
NCBI Gene 545867 ENTREZGENE
PhenoGen Gm5881 PhenoGen