RPL7P34 (ribosomal protein L7 pseudogene 34) - Rat Genome Database

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Gene: RPL7P34 (ribosomal protein L7 pseudogene 34) Homo sapiens
Analyze
Symbol: RPL7P34
Name: ribosomal protein L7 pseudogene 34
RGD ID: 2305524
HGNC Page HGNC:36181
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: RPL7_14_1078
Related Functional Gene: RPL7  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381088,618,382 - 88,618,951 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1088,618,223 - 88,618,934 (-)EnsemblGRCh38hg38GRCh38
GRCh371090,378,139 - 90,378,708 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361090,368,319 - 90,368,672 (-)NCBINCBI36Build 36hg18NCBI36
Celera1084,125,153 - 84,125,506 (-)NCBICelera
Cytogenetic Map10q23.31NCBI
HuRef1084,012,921 - 84,013,274 (-)NCBIHuRef
CHM1_11090,660,413 - 90,660,766 (-)NCBICHM1_1
T2T-CHM13v2.01089,502,470 - 89,503,039 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:19123937  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:53
Count of miRNA genes:52
Interacting mature miRNAs:52
Transcripts:ENST00000433316
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 4 1
Below cutoff 140 140 38 6 19 4 198 75 96 10 99 46 2 36 156

Sequence


RefSeq Acc Id: ENST00000433316
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1088,618,223 - 88,618,934 (-)Ensembl
RefSeq Acc Id: XR_016354
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
Build 361090,368,319 - 90,368,672 (-)NCBI Archive
Protein Sequences
GenBank Protein EAW50164 (Get FASTA)   NCBI Sequence Viewer  


Additional Information

Database Acc Id Source(s)
COSMIC RPL7P34 COSMIC
Ensembl Genes ENSG00000237205 Ensembl
GTEx ENSG00000237205 GTEx
HGNC ID HGNC:36181 ENTREZGENE
Human Proteome Map RPL7P34 Human Proteome Map
NCBI Gene 389992 ENTREZGENE