RPL30P10 (ribosomal protein L30 pseudogene 10) - Rat Genome Database

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Gene: RPL30P10 (ribosomal protein L30 pseudogene 10) Homo sapiens
Analyze
Symbol: RPL30P10
Name: ribosomal protein L30 pseudogene 10
RGD ID: 2305252
HGNC Page HGNC:36822
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: RPL30_5_906
Related Functional Gene: RPL30  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38857,392,546 - 57,392,882 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl857,392,546 - 57,392,882 (+)EnsemblGRCh38hg38GRCh38
GRCh37858,305,105 - 58,305,441 (+)NCBIGRCh37GRCh37hg19GRCh37
Celera854,298,578 - 54,298,914 (+)NCBICelera
Cytogenetic Map8q12.1NCBI
HuRef853,791,895 - 53,792,231 (+)NCBIHuRef
CHM1_1858,356,941 - 58,357,277 (+)NCBICHM1_1
T2T-CHM13v2.0857,814,085 - 57,814,421 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:19123937  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:79
Count of miRNA genes:69
Interacting mature miRNAs:69
Transcripts:ENST00000488148
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system adipose tissue appendage
High
Medium
Low 1 1 1
Below cutoff 4 5 3 7 6 1 7 5 7 3 2 3

Sequence


RefSeq Acc Id: ENST00000488148
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl857,392,546 - 57,392,882 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RPL30P10 COSMIC
Ensembl Genes ENSG00000243050 Ensembl, ENTREZGENE
GTEx ENSG00000243050 GTEx
HGNC ID HGNC:36822 ENTREZGENE
Human Proteome Map RPL30P10 Human Proteome Map
NCBI Gene 100270982 ENTREZGENE