RPL32P9 (ribosomal protein L32 pseudogene 9) - Rat Genome Database

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Gene: RPL32P9 (ribosomal protein L32 pseudogene 9) Homo sapiens
Analyze
Symbol: RPL32P9
Name: ribosomal protein L32 pseudogene 9
RGD ID: 2305242
HGNC Page HGNC:35481
Description:
Type: pseudo (Ensembl: transcribed_processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: RPL32_3_420
Related Functional Gene: RPL32  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383150,150,482 - 150,151,014 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3150,150,538 - 150,150,944 (+)EnsemblGRCh38hg38GRCh38
GRCh373149,868,269 - 149,868,801 (+)NCBIGRCh37GRCh37hg19GRCh37
Celera3148,281,657 - 148,282,066 (+)NCBICelera
Cytogenetic Map3q25.1NCBI
HuRef3147,242,127 - 147,242,536 (+)NCBIHuRef
CHM1_13149,831,710 - 149,832,119 (+)NCBICHM1_1
T2T-CHM13v2.03152,901,928 - 152,902,460 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:19123937  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:104
Count of miRNA genes:104
Interacting mature miRNAs:104
Transcripts:ENST00000487963
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 7 1 1 6 1 1
Low 13 32 9 1 54 3 188 113 43 55 336 23 7 159
Below cutoff 63 126 79 33 37 21 463 242 219 108 160 86 12 50 353

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000487963
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3150,150,538 - 150,150,944 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RPL32P9 COSMIC
Ensembl Genes ENSG00000241143 Ensembl
GTEx ENSG00000241143 GTEx
HGNC ID HGNC:35481 ENTREZGENE
Human Proteome Map RPL32P9 Human Proteome Map
NCBI Gene 100270992 ENTREZGENE