Gene: Gm11978 (predicted gene 11978) Mus musculus |
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Analyze |
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Symbol: |
Gm11978 |
Name: |
predicted gene 11978 |
RGD ID: |
2303896 |
MGI Page |
MGI |
Description: |
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Type: |
pseudo (Ensembl: transcribed_processed_pseudogene)
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RefSeq Status: |
PROVISIONAL |
Related Functional Gene: |
Chchd2
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Latest Assembly: |
GRCm39 - Mouse Genome Assembly GRCm39 |
Position: |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 6,600,148 - 6,610,236 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 6,600,148 - 6,610,233 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm39 Ensembl | 11 | 6,600,374 - 6,600,839 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 6,650,148 - 6,660,236 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 6,650,148 - 6,660,233 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 6,550,151 - 6,560,239 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 6,544,069 - 6,555,988 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 7,123,942 - 7,134,026 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | A1 | NCBI | | | | | cM Map | 11 | 4.61 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
miRNA Target Status
Predicted Target Of
Count of predictions: | 434 | Count of miRNA genes: | 353 | Interacting mature miRNAs: | 388 | Transcripts: | ENSMUST00000122315, ENSMUST00000127510, ENSMUST00000142928, ENSMUST00000143152 | Prediction methods: | Miranda, Rnahybrid, Targetscan | Result types: | miRGate_prediction | |
QTLs in Region (GRCm39)
1357722 | Vtbt11_m | vertebral trabecular bone trait 11 (mouse) | | | Not determined | | 11 | 1 | 23880487 | Mouse | 1300768 | Tshp9_m | tooth shape 9 (mouse) | | | Not determined | | 11 | 1 | 25976374 | Mouse | 1301765 | Skull15_m | skull morphology 15 (mouse) | | | Not determined | | 11 | 1 | 25976374 | Mouse | 1300661 | Lmr6_m | leishmaniasis resistance 6 (mouse) | | | Not determined | | 11 | 1 | 25976374 | Mouse | 10044008 | Hbnr15_m | Heligmosomoides bakeri nematode resistance 15 (mouse) | | | Not determined | | 11 | 227052 | 34227232 | Mouse | 1300599 | Cocrb11_m | cocaine related behavior 11 (mouse) | | | Not determined | | 11 | 2670355 | 36671472 | Mouse | 27095914 | Pglq16_m | pelvic girdle length QTL 16, 16 week (mouse) | | | | | 11 | 3250000 | 18150000 | Mouse | 27095919 | Pglq10_m | pelvic girdle length QTL 10, 10 week (mouse) | | | | | 11 | 3250000 | 18450000 | Mouse | 27095925 | Pglq5_m | pelvic girdle length QTL 5, 5 week (mouse) | | | | | 11 | 3250000 | 19750000 | Mouse | 27095904 | Scvln12_m | sacral vertebrae length 2, 10 week (mouse) | | | | | 11 | 3250000 | 34495048 | Mouse | 27095909 | Scvln6_m | sacral vertebrae length 2, 5 week (mouse) | | | | | 11 | 3250000 | 44090827 | Mouse | 27226798 | Scvln18_m | sacral vertebrae length 2, 16 week (mouse) | | | | | 11 | 3250000 | 60690826 | Mouse | 26884446 | Sklq10_m | skull length QTL 10, 10 week (mouse) | | | | | 11 | 3250000 | 62890826 | Mouse | 26884453 | Sklq16_m | skull length QTL 16, 16 week (mouse) | | | | | 11 | 3250000 | 72690826 | Mouse | 13208559 | Wght10_m | weight 10 (mouse) | | | | | 11 | 3950000 | 88890826 | Mouse | 13208558 | Lgth12_m | body length 12 (mouse) | | | | | 11 | 3950000 | 94890826 | Mouse | 10053676 | Eae44a_m | experimental allergic encephalomyelitis susceptibility 44a (mouse) | | | Not determined | | 11 | 4507896 | 21379532 | Mouse | 27226741 | Metcl5_m | metatarsal-calcaneal length 5, 5 week (mouse) | | | | | 11 | 4650000 | 46290827 | Mouse | 27226735 | Metcl16_m | metatarsal-calcaneal length 16, 16 week (mouse) | | | | | 11 | 5250000 | 35090827 | Mouse | |