Btbd35f12 (BTB domain containing 35, family member 12) - Rat Genome Database

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Gene: Btbd35f12 (BTB domain containing 35, family member 12) Mus musculus
Analyze
No known orthologs.
Symbol: Btbd35f12
Name: BTB domain containing 35, family member 12
RGD ID: 2303491
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 100040606; germ cell-less homolog 1 family member; Gm2863; hypothetical protein LOC100040606; novel protein similar to Germ cell-less protein-like 2 mGclh; predicted gene 2863; uncharacterized protein LOC100040606
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X32,750,801 - 32,752,751 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX32,750,842 - 32,752,749 (+)EnsemblGRCm39 Ensembl
GRCm38X33,313,338 - 33,315,288 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX33,313,379 - 33,315,286 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X31,349,047 - 31,350,997 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X31,349,048 - 31,350,997 (-)NCBIMGSCv36mm8
Cytogenetic MapXA3.1NCBI
cM MapX19.74NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21873635  


Genomics

Variants

.
Variants in Btbd35f12
2 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301551Spha1_msperm head anomaly 1 (mouse)Not determinedX1026622539921652Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
1558721Bw1_mbody weight QTL 1 (mouse)Not determinedX2060678347179225Mouse
12738418Lfibq12_mliver fibrosis QTL 12 (mouse)X2572817443635700Mouse

Markers in Region
px-11_c8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXA1.1UniSTS
Cytogenetic MapXA3.1UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000178827   ⟹   ENSMUSP00000137368
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX32,750,842 - 32,752,749 (+)Ensembl
GRCm38.p6 EnsemblX33,313,379 - 33,315,286 (+)Ensembl
RefSeq Acc Id: NM_001099333   ⟹   NP_001092803
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X32,750,801 - 32,752,751 (+)NCBI
GRCm38X33,313,338 - 33,315,288 (+)ENTREZGENE
MGSCv37X31,349,047 - 31,350,997 (-)RGD
cM MapX ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001092803 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000137368
  ENSMUSP00000137368.3
Reference Protein Sequences
RefSeq Acc Id: NP_001092803   ⟸   NM_001099333
- UniProtKB: A0A0A0MQP3 (UniProtKB/TrEMBL),   J3QNQ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000137368   ⟸   ENSMUST00000178827
Protein Domains
BTB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0A0MQP3-F1-model_v2 AlphaFold A0A0A0MQP3 1-498 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3781040 AgrOrtholog
Ensembl Genes ENSMUSG00000101500 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000178827 ENTREZGENE
  ENSMUST00000178827.3 UniProtKB/TrEMBL
InterPro BTB/POZ-like UniProtKB/TrEMBL
  BTB/POZ_fold UniProtKB/TrEMBL
  Gcl-like UniProtKB/TrEMBL
KEGG Report mmu:100040606 UniProtKB/TrEMBL
MGD MGI:3781040 ENTREZGENE
NCBI Gene 100040606 ENTREZGENE
PANTHER BTB DOMAIN-CONTAINING 35, FAMILY MEMBER 10-RELATED UniProtKB/TrEMBL
  PTHR23231 UniProtKB/TrEMBL
Pfam BTB UniProtKB/TrEMBL
PhenoGen Btbd35f12 PhenoGen
PROSITE BTB UniProtKB/TrEMBL
SMART BTB UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/TrEMBL
UniProt A0A0A0MQP3 ENTREZGENE, UniProtKB/TrEMBL
  J3QNQ5 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-11-08 Btbd35f12  BTB domain containing 35, family member 12  Gm2863  predicted gene 2863  Symbol and/or name change 5135510 APPROVED