Gm7995 (predicted gene 7995) - Rat Genome Database

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Gene: Gm7995 (predicted gene 7995) Mus musculus
Analyze
Symbol: Gm7995
Name: predicted gene 7995
RGD ID: 2301639
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 100041950; 666233; Gm3586; predicted gene 3586; uncharacterized protein Gm7995; uncharacterized protein LOC666233
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391442,062,797 - 42,147,353 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1442,106,952 - 42,147,353 (+)EnsemblGRCm39 Ensembl
GRCm381442,310,217 - 42,325,396 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1442,310,210 - 42,325,394 (+)EnsemblGRCm38mm10GRCm38
MGSCv371442,797,093 - 42,903,619 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361440,755,772 - 40,999,625 (+)NCBIMGSCv36mm8
Cytogenetic Map14BNCBI
cM Map1422.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Gm7995
273 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:278
Count of miRNA genes:232
Interacting mature miRNAs:247
Transcripts:ENSMUST00000089789, ENSMUST00000171967
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000089789   ⟹   ENSMUSP00000087222
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1442,132,167 - 42,134,230 (+)Ensembl
GRCm38.p6 Ensembl1442,310,210 - 42,312,273 (+)Ensembl
RefSeq Acc Id: ENSMUST00000171967   ⟹   ENSMUSP00000132956
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1442,132,168 - 42,147,351 (+)Ensembl
GRCm38.p6 Ensembl1442,310,211 - 42,325,394 (+)Ensembl
RefSeq Acc Id: ENSMUST00000249537
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1442,106,952 - 42,114,979 (+)Ensembl
RefSeq Acc Id: ENSMUST00000249538   ⟹   ENSMUSP00000159783
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1442,106,954 - 42,147,353 (+)Ensembl
RefSeq Acc Id: ENSMUST00000249539
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1442,106,955 - 42,114,977 (+)Ensembl
RefSeq Acc Id: ENSMUST00000249540   ⟹   ENSMUSP00000159784
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1442,106,955 - 42,147,351 (+)Ensembl
RefSeq Acc Id: NM_001403667   ⟹   NP_001390596
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391442,062,797 - 42,147,353 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001390596 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000159783
  ENSMUSP00000159783.1
  ENSMUSP00000159784.1
Reference Protein Sequences
RefSeq Acc Id: ENSMUSP00000132956   ⟸   ENSMUST00000171967
RefSeq Acc Id: ENSMUSP00000087222   ⟸   ENSMUST00000089789
RefSeq Acc Id: NP_001390596   ⟸   NM_001403667
- UniProtKB: E9Q6D7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000159783   ⟸   ENSMUST00000249538
RefSeq Acc Id: ENSMUSP00000159784   ⟸   ENSMUST00000249540

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-K7N665-F1-model_v2 AlphaFold K7N665 1-143 view protein structure


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000094157 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000249538 ENTREZGENE
  ENSMUST00000249538.1 UniProtKB/TrEMBL
  ENSMUST00000249540.1 UniProtKB/TrEMBL
MGD MGI:3779776 ENTREZGENE
NCBI Gene 666233 ENTREZGENE
PhenoGen Gm7995 PhenoGen
UniProt A0AA74KSP6_MOUSE UniProtKB/TrEMBL
  A0AA74KUS0_MOUSE UniProtKB/TrEMBL
  E9Q6D7 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-22 Gm7995  predicted gene 7995  Gm3586  predicted gene 3586  Data merged from RGD:2301661 737654 PROVISIONAL