TRG-TCC2-5 (tRNA-Gly (anticodon TCC) 2-5) - Rat Genome Database

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Gene: TRG-TCC2-5 (tRNA-Gly (anticodon TCC) 2-5) Homo sapiens
Analyze
Symbol: TRG-TCC2-5
Name: tRNA-Gly (anticodon TCC) 2-5
RGD ID: 2300938
HGNC Page HGNC:34598
Description:
Type: trna
RefSeq Status: MODEL
Previously known as: transfer RNA-Gly (TCC) 2-5; tRNA-Gly (TCC) 2-5; TRNAG9
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381161,469,757 - 161,469,828 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371161,439,547 - 161,439,618 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map1q23.3NCBI
CHM1_11162,833,670 - 162,833,741 (-)NCBICHM1_1
T2T-CHM13v2.01160,732,374 - 160,732,445 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:18984615  


Genomics


Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3 copy number gain See cases [RCV000143515] Chr1:149854269..180267197 [GRCh38]
Chr1:149825831..180236332 [GRCh37]
Chr1:148092455..178502955 [NCBI36]
Chr1:1q21.2-25.2		 pathogenic
GRCh38/hg38 1q23.2-24.1(chr1:159479887-166895086)x1 copy number loss See cases [RCV000051172] Chr1:159479887..166895086 [GRCh38]
Chr1:159449677..166864323 [GRCh37]
Chr1:157716301..165130947 [NCBI36]
Chr1:1q23.2-24.1		 pathogenic
GRCh38/hg38 1q23.1-25.1(chr1:157747246-176021247)x3 copy number gain See cases [RCV000051854] Chr1:157747246..176021247 [GRCh38]
Chr1:157717036..175990383 [GRCh37]
Chr1:155983660..174257006 [NCBI36]
Chr1:1q23.1-25.1		 pathogenic
GRCh38/hg38 1q23.3-24.2(chr1:160789732-168617494)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053913]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053913]|See cases [RCV000053913] Chr1:160789732..168617494 [GRCh38]
Chr1:160759522..168586732 [GRCh37]
Chr1:159026146..166853356 [NCBI36]
Chr1:1q23.3-24.2		 pathogenic

Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC TRG-TCC2-5 COSMIC
GTEx TRG-TCC2-5 GTEx
HGNC ID HGNC:34598 ENTREZGENE
Human Proteome Map TRG-TCC2-5 Human Proteome Map
NCBI Gene 100189039 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-09 TRG-TCC2-5  tRNA-Gly (anticodon TCC) 2-5    tRNA-Gly (TCC) 2-5  Symbol and/or name change 5135510 APPROVED
2018-11-29 TRG-TCC2-5  tRNA-Gly (TCC) 2-5    transfer RNA-Gly (TCC) 2-5  Symbol and/or name change 5135510 APPROVED
2014-06-24 TRG-TCC2-5  transfer RNA-Gly (TCC) 2-5  TRNAG9  transfer RNA glycine 9 (anticodon UCC)  Symbol and/or name change 5135510 APPROVED