TRP-CGG1-1 (tRNA-Pro (anticodon CGG) 1-1) - Rat Genome Database

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Gene: TRP-CGG1-1 (tRNA-Pro (anticodon CGG) 1-1) Homo sapiens
Analyze
Symbol: TRP-CGG1-1
Name: tRNA-Pro (anticodon CGG) 1-1
RGD ID: 2300766
HGNC Page HGNC:34774
Description:
Type: trna
RefSeq Status: MODEL
Previously known as: transfer RNA-Pro (CGG) 1-1; TRNAP11
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381167,714,725 - 167,714,796 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371167,683,962 - 167,684,033 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map1q24.2NCBI
HuRef1138,930,051 - 138,930,122 (+)NCBIHuRef
CHM1_11169,106,190 - 169,106,261 (+)NCBICHM1_1
T2T-CHM13v2.01167,066,220 - 167,066,291 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:18984615  


Genomics


Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q23.3-25.1(chr1:163382523-175877022)x1 copy number loss See cases [RCV000143292] Chr1:163382523..175877022 [GRCh38]
Chr1:163352313..175846158 [GRCh37]
Chr1:161618937..174112781 [NCBI36]
Chr1:1q23.3-25.1
pathogenic
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3 copy number gain See cases [RCV000143515] Chr1:149854269..180267197 [GRCh38]
Chr1:149825831..180236332 [GRCh37]
Chr1:148092455..178502955 [NCBI36]
Chr1:1q21.2-25.2
pathogenic
GRCh38/hg38 1q23.3-25.2(chr1:164922655-180061589)x3 copy number gain See cases [RCV000051856] Chr1:164922655..180061589 [GRCh38]
Chr1:164891892..180030724 [GRCh37]
Chr1:163158516..178297347 [NCBI36]
Chr1:1q23.3-25.2
pathogenic
GRCh38/hg38 1q23.1-25.1(chr1:157747246-176021247)x3 copy number gain See cases [RCV000051854] Chr1:157747246..176021247 [GRCh38]
Chr1:157717036..175990383 [GRCh37]
Chr1:155983660..174257006 [NCBI36]
Chr1:1q23.1-25.1
pathogenic
GRCh38/hg38 1q23.3-24.2(chr1:160789732-168617494)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053913]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053913]|See cases [RCV000053913] Chr1:160789732..168617494 [GRCh38]
Chr1:160759522..168586732 [GRCh37]
Chr1:159026146..166853356 [NCBI36]
Chr1:1q23.3-24.2
pathogenic
GRCh38/hg38 1q23.3-25.1(chr1:161740907-173965154)x1 copy number loss See cases [RCV000053914] Chr1:161740907..173965154 [GRCh38]
Chr1:161710697..173934292 [GRCh37]
Chr1:159977321..172200915 [NCBI36]
Chr1:1q23.3-25.1
pathogenic
GRCh38/hg38 1q23.3-24.3(chr1:164036599-171252077)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053916]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053916]|See cases [RCV000053916] Chr1:164036599..171252077 [GRCh38]
Chr1:164005836..171221216 [GRCh37]
Chr1:162272460..169487840 [NCBI36]
Chr1:1q23.3-24.3
pathogenic
GRCh38/hg38 1q24.1-25.1(chr1:166762832-175327423)x1 copy number loss See cases [RCV000053917] Chr1:166762832..175327423 [GRCh38]
Chr1:166732069..175296559 [GRCh37]
Chr1:164998693..173563182 [NCBI36]
Chr1:1q24.1-25.1
pathogenic

Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC TRP-CGG1-1 COSMIC
GTEx TRP-CGG1-1 GTEx
HGNC ID HGNC:34774 ENTREZGENE
Human Proteome Map TRP-CGG1-1 Human Proteome Map
NCBI Gene 100189211 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-09 TRP-CGG1-1  tRNA-Pro (anticodon CGG) 1-1    transfer RNA-Pro (CGG) 1-1  Symbol and/or name change 5135510 APPROVED
2014-06-24 TRP-CGG1-1  transfer RNA-Pro (CGG) 1-1  TRNAP11  transfer RNA proline 11 (anticodon CGG)  Symbol and/or name change 5135510 APPROVED