TRL-CAA5-1 (tRNA-Leu (CAA) 5-1) - Rat Genome Database

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Gene: TRL-CAA5-1 (tRNA-Leu (CAA) 5-1) Homo sapiens
Analyze
Symbol: TRL-CAA5-1
Name: tRNA-Leu (CAA) 5-1
RGD ID: 2300607
HGNC Page HGNC:34938
Description:
Type: trna
RefSeq Status: MODEL
Previously known as: transfer RNA-Leu (CAA) 5-1; TRNAL36
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38119,275,243 - 9,275,316 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37119,296,790 - 9,296,863 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map11p15.4NCBI
HuRef118,969,506 - 8,969,579 (+)NCBIHuRef
CHM1_1119,295,738 - 9,295,811 (+)NCBICHM1_1
T2T-CHM13v2.0119,360,084 - 9,360,157 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:18984615  


Genomics


Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 11p15.5-15.1(chr11:446754-18904742)x3 copy number gain See cases [RCV000133997] Chr11:446754..18904742 [GRCh38]
Chr11:446754..18926289 [GRCh37]
Chr11:436754..18882865 [NCBI36]
Chr11:11p15.5-15.1		 pathogenic
GRCh38/hg38 11p15.4(chr11:9166889-9494694)x3 copy number gain See cases [RCV000139156] Chr11:9166889..9494694 [GRCh38]
Chr11:9188436..9516241 [GRCh37]
Chr11:9145012..9472817 [NCBI36]
Chr11:11p15.4		 uncertain significance
GRCh38/hg38 11p15.5-15.4(chr11:61793-10727969)x3 copy number gain See cases [RCV000139987] Chr11:61793..10727969 [GRCh38]
Chr11:61793..10749516 [GRCh37]
Chr11:51793..10706092 [NCBI36]
Chr11:11p15.5-15.4		 pathogenic
GRCh38/hg38 11p15.4(chr11:7995676-10437205)x3 copy number gain See cases [RCV000143490] Chr11:7995676..10437205 [GRCh38]
Chr11:8017223..10458752 [GRCh37]
Chr11:7973799..10415328 [NCBI36]
Chr11:11p15.4		 uncertain significance
GRCh38/hg38 11p15.5-13(chr11:202758-31726224)x3 copy number gain See cases [RCV000053613] Chr11:202758..31726224 [GRCh38]
Chr11:202758..31747772 [GRCh37]
Chr11:192758..31704348 [NCBI36]
Chr11:11p15.5-13		 pathogenic

Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC TRL-CAA5-1 COSMIC
GTEx TRL-CAA5-1 GTEx
HGNC ID HGNC:34938 ENTREZGENE
Human Proteome Map TRL-CAA5-1 Human Proteome Map
NCBI Gene 100189370 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-11-29 TRL-CAA5-1  tRNA-Leu (CAA) 5-1    transfer RNA-Leu (CAA) 5-1  Symbol and/or name change 5135510 APPROVED
2014-06-24 TRL-CAA5-1  transfer RNA-Leu (CAA) 5-1  TRNAL36  transfer RNA leucine 36 (anticodon CAA)  Symbol and/or name change 5135510 APPROVED